Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ABZS46_RS07860 Genome accession   NZ_CP160098
Coordinates   1620955..1621941 (+) Length   328 a.a.
NCBI ID   WP_412521715.1    Uniprot ID   -
Organism   Staphylococcus aureus strain C_01_sau     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1615955..1626941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABZS46_RS07835 (ABZS46_07835) - 1616789..1617298 (+) 510 Protein_1528 transposase -
  ABZS46_RS07840 (ABZS46_07840) trpS 1617324..1618313 (-) 990 WP_000448941.1 tryptophan--tRNA ligase -
  ABZS46_RS07845 (ABZS46_07845) spxA 1618607..1619002 (+) 396 WP_000258001.1 transcriptional regulator SpxA -
  ABZS46_RS07850 (ABZS46_07850) tnpA 1619214..1619699 (+) 486 WP_000093392.1 IS200/IS605 family transposase -
  ABZS46_RS07855 (ABZS46_07855) mecA 1620115..1620834 (+) 720 WP_001217724.1 adaptor protein MecA -
  ABZS46_RS07860 (ABZS46_07860) coiA 1620955..1621941 (+) 987 WP_412521715.1 competence protein CoiA Machinery gene
  ABZS46_RS07865 (ABZS46_07865) pepF 1621989..1623797 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  ABZS46_RS07870 (ABZS46_07870) yjbH 1624257..1625063 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  ABZS46_RS07875 (ABZS46_07875) - 1625086..1625451 (-) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ABZS46_RS07880 (ABZS46_07880) - 1625555..1626148 (-) 594 WP_000224622.1 CYTH domain-containing protein -
  ABZS46_RS07885 (ABZS46_07885) - 1626334..1626681 (+) 348 WP_001242102.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38739.43 Da        Isoelectric Point: 9.5881

>NTDB_id=1017971 ABZS46_RS07860 WP_412521715.1 1620955..1621941(+) (coiA) [Staphylococcus aureus strain C_01_sau]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFPSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLLLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1017971 ABZS46_RS07860 WP_412521715.1 1620955..1621941(+) (coiA) [Staphylococcus aureus strain C_01_sau]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCCAAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTTGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCCGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATTGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAACCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-308)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

99.085

100

0.991
  coiA Staphylococcus aureus MW2

97.561

100

0.976

Multiple sequence alignment