Detailed information NTG1009385

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: H0505_RS08525
• Genome accession: NZ_LR822012
• Coordinates: 1652605..1653033 (-)
• Length: 142 a.a.
• NCBI ID: WP_253269448.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_30
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1647605..1658033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0505_RS08485 (STHERMO_1882)	-	1647742..1648035 (-)	294	WP_232085688.1	hypothetical protein	-
H0505_RS09930 (STHERMO_1883)	-	1648260..1648685 (-)	426	WP_111679733.1	CPBP family intramembrane glutamic endopeptidase	-
H0505_RS08495 (STHERMO_1885)	-	1648928..1649125 (-)	198	WP_002885716.1	helix-turn-helix transcriptional regulator	-
H0505_RS08500 (STHERMO_1886)	-	1649374..1650567 (-)	1194	WP_084831204.1	acetate kinase	-
H0505_RS08505 (STHERMO_1887)	comGH	1650623..1651579 (-)	957	WP_084831205.1	class I SAM-dependent methyltransferase	Machinery gene
H0505_RS08510 (STHERMO_1888)	comGG	1651624..1651941 (-)	318	WP_082309152.1	competence type IV pilus minor pilin ComGG	Machinery gene
H0505_RS08515 (STHERMO_1889)	comGF	1651919..1652356 (-)	438	WP_082309153.1	competence type IV pilus minor pilin ComGF	Machinery gene
H0505_RS08520 (STHERMO_1890)	comGE	1652340..1652633 (-)	294	WP_082309154.1	competence type IV pilus minor pilin ComGE	Machinery gene
H0505_RS08525 (STHERMO_1891)	comGD	1652605..1653033 (-)	429	WP_253269448.1	competence type IV pilus minor pilin ComGD	Machinery gene
H0505_RS08530 (STHERMO_1892)	comGC	1652993..1653319 (-)	327	WP_002946126.1	competence type IV pilus major pilin ComGC	Machinery gene
H0505_RS08535 (STHERMO_1893)	comGB	1653316..1654416 (-)	1101	WP_120764773.1	competence type IV pilus assembly protein ComGB	Machinery gene
H0505_RS08540 (STHERMO_1894)	comGA	1654298..1655239 (-)	942	WP_084829888.1	competence type IV pilus ATPase ComGA	Machinery gene
H0505_RS08545 (STHERMO_1895)	-	1655320..1655682 (-)	363	WP_011226630.1	DUF1033 family protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15829.42 Da
• Isoelectric Point: 10.3330

>NTDB_id=1009385 H0505_RS08525 WP_253269448.1 1652605..1653033(-) (comGD) [Streptococcus thermophilus isolate STH_CIRM_30]
MRNMVVKAAQWPIRAFTLLESLMTLAVVVFLTLSLSGSVTGIFQQVEINLFYLRFEYLYRDSQRLASAEGSNVELQLTKD
KVGNGRSSLLIPKSIHLDKGQTLVFDAKGGNSSLTKIRFSSDKEVVTYLLNMGSGKYKKTIS

Nucleotide

• Length: 429 bp

>NTDB_id=1009385 H0505_RS08525 WP_253269448.1 1652605..1653033(-) (comGD) [Streptococcus thermophilus isolate STH_CIRM_30]
ATGCGAAACATGGTGGTGAAAGCCGCTCAGTGGCCAATTAGAGCTTTCACCTTGTTGGAGAGCCTGATGACACTAGCAGT
GGTTGTCTTTCTCACTCTGAGTTTGTCAGGCTCAGTCACAGGTATTTTTCAGCAGGTCGAGATTAATCTTTTTTATCTGC
GTTTTGAGTACCTATATCGAGATAGTCAGCGCTTGGCATCAGCGGAAGGATCTAATGTTGAATTGCAGTTAACTAAGGAT
AAGGTTGGTAATGGAAGGTCTAGTCTGCTTATTCCTAAAAGTATTCATCTGGATAAGGGGCAGACGCTAGTGTTTGATGC
TAAAGGGGGCAACTCTAGCCTCACGAAAATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCTGCTTAACATGGGCA
GTGGTAAATATAAAAAGACGATCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus mutans UA140	51.908	92.254	0.479
comGD	Streptococcus mutans UA159	51.908	92.254	0.479
comGD	Streptococcus gordonii str. Challis substr. CH1	40.714	98.592	0.401
comGD/cglD	Streptococcus pneumoniae Rx1	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae D39	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae R6	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis NCTC 12261	43.307	89.437	0.387
comGD/cglD	Streptococcus pneumoniae TIGR4	43.307	89.437	0.387
comGD/cglD	Streptococcus mitis SK321	42.52	89.437	0.38
comGD	Lactococcus lactis subsp. cremoris KW2	40.909	92.958	0.38