Detailed information NTG1009176

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABK447_RS07210
• Genome accession: NZ_CP157943
• Coordinates: 1391538..1392152 (+)
• Length: 204 a.a.
• NCBI ID: WP_043021637.1
• Uniprot ID: -
• Organism: Bacillus sp. hwrm1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1386538..1397152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABK447_RS07175 (ABK447_07165)	aroE	1387225..1388067 (+)	843	WP_094031849.1	shikimate dehydrogenase	-
ABK447_RS07180 (ABK447_07170)	yhbY	1388061..1388351 (+)	291	WP_007408257.1	ribosome assembly RNA-binding protein YhbY	-
ABK447_RS07185 (ABK447_07175)	-	1388362..1388931 (+)	570	WP_007408258.1	nicotinate-nucleotide adenylyltransferase	-
ABK447_RS07190 (ABK447_07180)	yqeK	1388921..1389481 (+)	561	WP_014418422.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABK447_RS07195 (ABK447_07185)	rsfS	1389499..1389855 (+)	357	WP_007408260.1	ribosome silencing factor	-
ABK447_RS07200 (ABK447_07190)	-	1389852..1390589 (+)	738	WP_076424998.1	class I SAM-dependent methyltransferase	-
ABK447_RS07205 (ABK447_07195)	comER	1390658..1391479 (-)	822	WP_012118027.1	late competence protein ComER	-
ABK447_RS07210 (ABK447_07200)	comEA	1391538..1392152 (+)	615	WP_043021637.1	helix-hairpin-helix domain-containing protein	Machinery gene
ABK447_RS07215 (ABK447_07205)	-	1392219..1392788 (+)	570	WP_094031848.1	ComE operon protein 2	-
ABK447_RS07220 (ABK447_07210)	comEC	1392789..1395140 (+)	2352	WP_094031847.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABK447_RS07225 (ABK447_07215)	-	1395159..1395293 (-)	135	WP_003152870.1	YqzM family protein	-
ABK447_RS07230 (ABK447_07220)	-	1395334..1395485 (+)	152	Protein_1414	hypothetical protein	-
ABK447_RS07235 (ABK447_07225)	holA	1395525..1396566 (+)	1042	Protein_1415	DNA polymerase III subunit delta	-
ABK447_RS07240 (ABK447_07230)	rpsT	1396583..1396849 (-)	267	WP_003152876.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 22165.31 Da
• Isoelectric Point: 6.4888

>NTDB_id=1009176 ABK447_RS07210 WP_043021637.1 1391538..1392152(+) (comEA) [Bacillus sp. hwrm1]
MTKAMMTERLRRNLKILGACLAAGAVFICIWLFRSEKEEPVKQQSVLGQTASASVADKKDTAADKIMIDVKGAVRNPGVY
EMKAGDRVTQAIEKAGGLKKKADELNVNLAEQLQDGTIVYIPSEGEEENRPKTAAGEKENAAVNINTASLDELQAISGVG
QKKAEAIIAYREENGRFQTAEDLMNVSGFGEKSFERIKTSITVK

Nucleotide

• Length: 615 bp

>NTDB_id=1009176 ABK447_RS07210 WP_043021637.1 1391538..1392152(+) (comEA) [Bacillus sp. hwrm1]
ATGACGAAAGCGATGATGACGGAGCGGCTGCGGCGGAACCTGAAAATTCTGGGCGCTTGTCTTGCGGCAGGGGCGGTTTT
TATCTGCATTTGGCTGTTTCGTTCTGAAAAGGAAGAGCCGGTCAAACAGCAGTCTGTGCTCGGCCAAACAGCCTCAGCAT
CCGTCGCGGACAAAAAAGACACCGCAGCCGATAAGATTATGATTGATGTGAAAGGCGCGGTCCGAAATCCCGGCGTGTAT
GAAATGAAAGCGGGAGACAGGGTGACGCAAGCCATTGAAAAAGCCGGCGGCCTGAAGAAAAAGGCGGATGAATTGAATGT
TAATTTAGCAGAGCAGCTGCAGGACGGGACGATTGTTTATATTCCGAGTGAAGGCGAAGAGGAGAATCGCCCGAAAACAG
CAGCGGGTGAAAAGGAGAATGCAGCTGTCAATATCAATACGGCATCTCTGGACGAACTTCAGGCGATTTCCGGGGTGGGG
CAGAAAAAAGCGGAAGCGATTATCGCCTACCGAGAAGAAAACGGACGGTTTCAGACTGCTGAAGATTTGATGAATGTATC
AGGCTTTGGAGAAAAGTCATTTGAGCGGATAAAAACTTCCATTACGGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-202)

• SLBB domain (SLBB) (68-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	58.854	94.118	0.554
comEA	Latilactobacillus sakei subsp. sakei 23K	32.759	100	0.373
comEA/celA/cilE	Streptococcus mitis NCTC 12261	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae Rx1	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae D39	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae R6	35.545	100	0.368
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	35.545	100	0.368
comEA/celA/cilE	Streptococcus mitis SK321	35.071	100	0.363