Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | ABLU29_RS04065 | Genome accession | NZ_CP157498 |
| Coordinates | 714927..715202 (+) | Length | 91 a.a. |
| NCBI ID | WP_257012268.1 | Uniprot ID | - |
| Organism | Lactococcus lactis strain 2B-5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 709927..720202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLU29_RS04035 (ABLU29_04025) | comGA | 711509..712447 (+) | 939 | WP_058212859.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABLU29_RS04040 (ABLU29_04030) | comGB | 712341..713414 (+) | 1074 | WP_406835453.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABLU29_RS04045 (ABLU29_04035) | comGC | 713428..713811 (+) | 384 | WP_010906318.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABLU29_RS04050 (ABLU29_04040) | comGD | 713786..714202 (+) | 417 | WP_021216554.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABLU29_RS04055 (ABLU29_04045) | comGE | 714174..714470 (+) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABLU29_RS04060 (ABLU29_04050) | comGF | 714433..714879 (+) | 447 | WP_029344525.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABLU29_RS04065 (ABLU29_04055) | comGG | 714927..715202 (+) | 276 | WP_257012268.1 | hypothetical protein | Machinery gene |
| ABLU29_RS04070 (ABLU29_04060) | - | 715283..715720 (+) | 438 | WP_058213216.1 | zinc-dependent MarR family transcriptional regulator | - |
| ABLU29_RS04075 (ABLU29_04065) | - | 715717..716559 (+) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| ABLU29_RS04080 (ABLU29_04070) | - | 716736..717473 (+) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| ABLU29_RS04085 (ABLU29_04075) | - | 717466..718275 (+) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| ABLU29_RS04090 (ABLU29_04080) | - | 718314..719180 (-) | 867 | WP_058213299.1 | RluA family pseudouridine synthase | - |
| ABLU29_RS04095 (ABLU29_04085) | - | 719385..719762 (+) | 378 | WP_003129983.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10417.58 Da Isoelectric Point: 5.0604
>NTDB_id=1007232 ABLU29_RS04065 WP_257012268.1 714927..715202(+) (comGG) [Lactococcus lactis strain 2B-5]
MFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDEKTYQFSIH
LKDGANFQIKN
MFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDEKTYQFSIH
LKDGANFQIKN
Nucleotide
Download Length: 276 bp
>NTDB_id=1007232 ABLU29_RS04065 WP_257012268.1 714927..715202(+) (comGG) [Lactococcus lactis strain 2B-5]
ATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTTAACAGCTGA
ATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGAGATTTGTCCTACA
ATTTACTGACAGATTCGTCAGCCAGTTCAAAAATTACTGACCATTCAAGTGATGAAAAAACTTATCAATTTAGTATCCAT
CTAAAAGATGGCGCAAACTTTCAAATAAAAAATTAA
ATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTTAACAGCTGA
ATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGAGATTTGTCCTACA
ATTTACTGACAGATTCGTCAGCCAGTTCAAAAATTACTGACCATTCAAGTGATGAAAAAACTTATCAATTTAGTATCCAT
CTAAAAGATGGCGCAAACTTTCAAATAAAAAATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
58.889 |
98.901 |
0.582 |