Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ABLU29_RS04055 | Genome accession | NZ_CP157498 |
| Coordinates | 714174..714470 (+) | Length | 98 a.a. |
| NCBI ID | WP_010906316.1 | Uniprot ID | A0A3N6L9Y1 |
| Organism | Lactococcus lactis strain 2B-5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 709174..719470
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLU29_RS04035 (ABLU29_04025) | comGA | 711509..712447 (+) | 939 | WP_058212859.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABLU29_RS04040 (ABLU29_04030) | comGB | 712341..713414 (+) | 1074 | WP_406835453.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABLU29_RS04045 (ABLU29_04035) | comGC | 713428..713811 (+) | 384 | WP_010906318.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABLU29_RS04050 (ABLU29_04040) | comGD | 713786..714202 (+) | 417 | WP_021216554.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABLU29_RS04055 (ABLU29_04045) | comGE | 714174..714470 (+) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABLU29_RS04060 (ABLU29_04050) | comGF | 714433..714879 (+) | 447 | WP_029344525.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABLU29_RS04065 (ABLU29_04055) | comGG | 714927..715202 (+) | 276 | WP_257012268.1 | hypothetical protein | Machinery gene |
| ABLU29_RS04070 (ABLU29_04060) | - | 715283..715720 (+) | 438 | WP_058213216.1 | zinc-dependent MarR family transcriptional regulator | - |
| ABLU29_RS04075 (ABLU29_04065) | - | 715717..716559 (+) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| ABLU29_RS04080 (ABLU29_04070) | - | 716736..717473 (+) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| ABLU29_RS04085 (ABLU29_04075) | - | 717466..718275 (+) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| ABLU29_RS04090 (ABLU29_04080) | - | 718314..719180 (-) | 867 | WP_058213299.1 | RluA family pseudouridine synthase | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11076.95 Da Isoelectric Point: 6.4684
>NTDB_id=1007230 ABLU29_RS04055 WP_010906316.1 714174..714470(+) (comGE) [Lactococcus lactis strain 2B-5]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMRLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=1007230 ABLU29_RS04055 WP_010906316.1 714174..714470(+) (comGE) [Lactococcus lactis strain 2B-5]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCACTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCGACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
68.041 |
98.98 |
0.673 |