Detailed information NTG1006191

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: ABG082_RS16390
• Genome accession: NZ_CP157353
• Coordinates: 3165898..3166584 (-)
• Length: 228 a.a.
• NCBI ID: WP_216942854.1
• Uniprot ID: -
• Organism: Bacillus sp. BS1807G30
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3160898..3171584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABG082_RS16355 (ABG082_16355)	fliW	3161034..3161468 (-)	435	WP_348936272.1	flagellar assembly protein FliW	-
ABG082_RS16360 (ABG082_16360)	-	3161497..3162075 (-)	579	WP_047945621.1	DUF6470 family protein	-
ABG082_RS16365 (ABG082_16365)	flgL	3162122..3163033 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
ABG082_RS16370 (ABG082_16370)	flgK	3163042..3164562 (-)	1521	WP_058336981.1	flagellar hook-associated protein FlgK	-
ABG082_RS16375 (ABG082_16375)	-	3164578..3165060 (-)	483	WP_007499977.1	flagellar protein FlgN	-
ABG082_RS16380 (ABG082_16380)	flgM	3165079..3165342 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
ABG082_RS16385 (ABG082_16385)	-	3165422..3165841 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
ABG082_RS16390 (ABG082_16390)	comFC	3165898..3166584 (-)	687	WP_216942854.1	ComF family protein	Machinery gene
ABG082_RS16395 (ABG082_16395)	-	3166581..3166874 (-)	294	WP_008348267.1	competence protein ComFB	-
ABG082_RS16400 (ABG082_16400)	comFA	3166939..3168066 (-)	1128	WP_234898350.1	DEAD/DEAH box helicase	Machinery gene
ABG082_RS16405 (ABG082_16405)	-	3168438..3169280 (-)	843	WP_144683538.1	DegV family protein	-
ABG082_RS16410 (ABG082_16410)	degU	3169492..3170181 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ABG082_RS16415 (ABG082_16415)	degS	3170246..3171421 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26228.75 Da
• Isoelectric Point: 10.2389

>NTDB_id=1006191 ABG082_RS16390 WP_216942854.1 3165898..3166584(-) (comFC) [Bacillus sp. BS1807G30]
MICPICESHFVADFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVQSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QRKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=1006191 ABG082_RS16390 WP_216942854.1 3165898..3166584(-) (comFC) [Bacillus sp. BS1807G30]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGATTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACCTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAAGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACAGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTGCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGGAAGCAGTCAAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (162-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50	100	0.504
comFC/cflB	Streptococcus mitis SK321	38.865	100	0.39
comFC/cflB	Streptococcus mitis NCTC 12261	38.428	100	0.386
comFC/cflB	Streptococcus pneumoniae R6	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae TIGR4	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae Rx1	37.555	100	0.377
comFC/cflB	Streptococcus pneumoniae D39	37.555	100	0.377