Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | BAMY6639_RS18935 | Genome accession | NZ_CP006058 |
| Coordinates | 3881430..3881792 (+) | Length | 120 a.a. |
| NCBI ID | WP_003154238.1 | Uniprot ID | A0A150FA43 |
| Organism | Bacillus amyloliquefaciens UMAF6639 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3876430..3886792
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAMY6639_RS18905 (BAMY6639_19815) | flgD | 3877333..3877773 (+) | 441 | WP_015239855.1 | flagellar hook assembly protein FlgD | - |
| BAMY6639_RS18910 (BAMY6639_19820) | flgG | 3877798..3878574 (+) | 777 | WP_007409783.1 | flagellar basal body rod protein FlgG | - |
| BAMY6639_RS18915 (BAMY6639_19825) | - | 3878614..3878829 (+) | 216 | WP_003154243.1 | flagellar FlbD family protein | - |
| BAMY6639_RS18920 (BAMY6639_19830) | fliL | 3878826..3879245 (+) | 420 | WP_014417773.1 | flagellar basal body-associated protein FliL | - |
| BAMY6639_RS18925 (BAMY6639_19835) | fliM | 3879279..3880277 (+) | 999 | WP_003154240.1 | flagellar motor switch protein FliM | - |
| BAMY6639_RS18930 (BAMY6639_19840) | fliY | 3880267..3881403 (+) | 1137 | WP_060675467.1 | flagellar motor switch phosphatase FliY | - |
| BAMY6639_RS18935 (BAMY6639_19845) | pilH | 3881430..3881792 (+) | 363 | WP_003154238.1 | chemotaxis protein CheY | Machinery gene |
| BAMY6639_RS18940 (BAMY6639_19850) | fliZ | 3881807..3882460 (+) | 654 | WP_020955822.1 | flagella biosynthesis regulatory protein FliZ | - |
| BAMY6639_RS18945 (BAMY6639_19855) | fliP | 3882453..3883118 (+) | 666 | WP_007409786.1 | flagellar type III secretion system pore protein FliP | - |
| BAMY6639_RS18950 (BAMY6639_19860) | fliQ | 3883133..3883402 (+) | 270 | WP_003154234.1 | flagellar biosynthesis protein FliQ | - |
| BAMY6639_RS18955 (BAMY6639_19865) | fliR | 3883409..3884188 (+) | 780 | WP_003154233.1 | flagellar biosynthetic protein FliR | - |
| BAMY6639_RS18960 (BAMY6639_19870) | flhB | 3884188..3885267 (+) | 1080 | WP_007409787.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13209.53 Da Isoelectric Point: 4.6805
>NTDB_id=100244 BAMY6639_RS18935 WP_003154238.1 3881430..3881792(+) (pilH) [Bacillus amyloliquefaciens UMAF6639]
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
MAHRILIVDDAAFMRMMIKDILVKNGFDVVAEASDGAQAVEKFKEHSPDLVTMDITMPEMDGITALKEIKQIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVLEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=100244 BAMY6639_RS18935 WP_003154238.1 3881430..3881792(+) (pilH) [Bacillus amyloliquefaciens UMAF6639]
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
ATGGCACACAGAATTTTAATTGTAGACGATGCAGCATTTATGAGAATGATGATCAAAGATATTTTAGTGAAGAACGGTTT
TGACGTTGTAGCTGAAGCTTCAGACGGAGCGCAGGCAGTCGAAAAATTCAAAGAGCATTCCCCCGACCTTGTGACAATGG
ATATTACAATGCCTGAAATGGACGGGATTACAGCTTTAAAGGAAATTAAACAAATCGATCCGCAGGCGAAAATCATCATG
TGTTCGGCTATGGGCCAGCAGTCAATGGTTATTGACGCGATTCAAGCCGGCGCAAAAGACTTTATCGTGAAACCGTTCCA
AGCGGACCGCGTGCTTGAAGCTATTAATAAAACATTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.983 |
98.333 |
0.383 |