Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ABFK62_RS18400 | Genome accession | NZ_CP156044 |
| Coordinates | 3761986..3762513 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695059.1 | Uniprot ID | A0A0D5YDP9 |
| Organism | Acinetobacter baumannii strain D13 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3756986..3767513
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFK62_RS18380 (ABFK62_18380) | - | 3757175..3758050 (-) | 876 | WP_000218810.1 | hypothetical protein | - |
| ABFK62_RS18385 (ABFK62_18385) | aroB | 3758066..3759148 (-) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| ABFK62_RS18390 (ABFK62_18390) | aroK | 3759177..3759746 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| ABFK62_RS18395 (ABFK62_18395) | pilQ | 3759758..3761923 (-) | 2166 | WP_001017040.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ABFK62_RS18400 (ABFK62_18400) | pilP | 3761986..3762513 (-) | 528 | WP_000695059.1 | pilus assembly protein PilP | Machinery gene |
| ABFK62_RS18405 (ABFK62_18405) | pilO | 3762524..3763264 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABFK62_RS18410 (ABFK62_18410) | pilN | 3763261..3763902 (-) | 642 | WP_000201229.1 | PilN domain-containing protein | Machinery gene |
| ABFK62_RS18415 (ABFK62_18415) | pilM | 3763902..3764960 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19371.59 Da Isoelectric Point: 9.0270
>NTDB_id=1001561 ABFK62_RS18400 WP_000695059.1 3761986..3762513(-) (pilP) [Acinetobacter baumannii strain D13]
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=1001561 ABFK62_RS18400 WP_000695059.1 3761986..3762513(-) (pilP) [Acinetobacter baumannii strain D13]
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
98.286 |
100 |
0.983 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |