NZ_LS483297631073..642747

MGE detailed information

MGE type: Genomic_island        MGE length: 11675 bp
Accession: NZ_LS483297        Location: 631073..642747         Organism: Escherichia coli strain NCTC11023       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
DQM98_RS03285 () 626074..626508 - 435 WP_000948824.1 PTS sugar transporter subunit IIA -
DQM98_RS03290 () 626526..627404 - 879 WP_001300474.1 PTS system mannose/fructose/sorbose family transporter subunit IID -
DQM98_RS03295 () 627394..628173 - 780 WP_000406214.1 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC -
DQM98_RS03300 () 628184..628657 - 474 WP_001295547.1 PTS N-acetylgalactosamine transporter subunit IIB -
DQM98_RS03305 () 628680..629960 - 1281 WP_000681903.1 tagatose-bisphosphate aldolase subunit KbaZ -
DQM98_RS03315 () 630209..631018 + 810 WP_000072187.1 aga operon transcriptional regulator AgaR -
DQM98_RS03320 () 631073..631537 - 465 WP_000347273.1 type II toxin-antitoxin system ribonuclease toxin YhaV Toxin Detail
DQM98_RS03325 () 631537..631872 - 336 WP_021547164.1 type II toxin-antitoxin system antitoxin PrlF Antitoxin Detail
DQM98_RS03330 () 632021..633592 - 1572 WP_001753084.1 galactarate dehydratase -
DQM98_RS03335 () 633967..635301 + 1335 WP_000599651.1 galactarate/glucarate/glycerate transporter GarP -
DQM98_RS03340 () 635317..636087 + 771 WP_111732345.1 2-dehydro-3-deoxyglucarate aldolase -
DQM98_RS03345 () 636117..637007 + 891 WP_001303675.1 2-hydroxy-3-oxopropionate reductase -
DQM98_RS03350 () 637104..638249 + 1146 WP_001300387.1 glycerate 2-kinase -
DQM98_RS03360 () 639272..640459 - 1188 WP_089622093.1 YhaC family protein -
DQM98_RS03365 () 640481..641020 - 540 WP_040061853.1 hypothetical protein -
DQM98_RS24660 () 641276..641494 - 219 WP_001301311.1 transcriptional activator TdcR -
DQM98_RS03375 () 641809..642747 + 939 WP_000104211.1 transcriptional regulator TdcA -
DQM98_RS03380 () 642846..643835 + 990 WP_000548347.1 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB -
DQM98_RS03385 () 643857..645188 + 1332 WP_000107723.1 threonine/serine transporter TdcC -
DQM98_RS03390 () 645214..646422 + 1209 WP_001295545.1 propionate kinase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Genomic island TA20080 HG738867 3504819..3516493 0.007
Escherichia coli str. K-12 substr. W3110 Genomic island TA21455 NC_007779 3265982..3277656 0.007
Escherichia coli HS Genomic island TA22436 NC_009800 3314965..3326421 0.01
Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 Genomic island TA68442 NZ_CP017979 3158126..3169800 0.007
Escherichia coli C Genomic island TA75057 NZ_CP020543 640607..652281 0.007
Escherichia coli str. K-12 substr. MC4100 strain K-12 Genomic island TA285025 NZ_HG738867 3504819..3516493 0.007