MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97332 bp
Accession: NZ_CP117862 Location: 1..97332 Organism: Komagataeibacter oboediens strain NCIB 8034 Replicon: plasmid pKOB3
Accession: NZ_CP117862 Location: 1..97332 Organism: Komagataeibacter oboediens strain NCIB 8034 Replicon: plasmid pKOB3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LV478_RS18525 (LV478_18540) | 1168..1404 | + | 237 | WP_083824341.1 | DUF4160 domain-containing protein | - |
| LV478_RS18530 (LV478_18545) | 1394..1801 | + | 408 | WP_099542224.1 | DUF2442 domain-containing protein | - |
| LV478_RS18535 (LV478_18550) | 2115..2357 | + | 243 | WP_053324047.1 | BrnA antitoxin family protein | - |
| LV478_RS18540 (LV478_18555) | 3033..3284 | + | 252 | WP_275879433.1 | plasmid stabilization protein | Antitoxin Detail |
| LV478_RS18545 (LV478_18560) | 3281..3703 | + | 423 | WP_275879407.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LV478_RS18550 (LV478_18565) | 3909..4640 | - | 732 | WP_275879434.1 | SprT family zinc-dependent metalloprotease | - |
| LV478_RS18555 (LV478_18570) | 4640..7942 | - | 3303 | WP_275879409.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LV478_RS18560 (LV478_18575) | 7973..9190 | - | 1218 | WP_275879410.1 | restriction endonuclease subunit S | - |
| LV478_RS18565 (LV478_18580) | 9180..10706 | - | 1527 | WP_275879411.1 | type I restriction-modification system subunit M | - |
| LV478_RS18570 (LV478_18585) | 10740..11321 | - | 582 | WP_275879412.1 | restriction endonuclease subunit S | - |
| LV478_RS18575 (LV478_18590) | 11628..12275 | + | 648 | WP_275879435.1 | hypothetical protein | - |
| LV478_RS18580 (LV478_18595) | 12402..13217 | + | 816 | WP_275879414.1 | hypothetical protein | - |
| LV478_RS18590 (LV478_18605) | 14584..14868 | - | 285 | WP_275879437.1 | Fic/DOC family N-terminal domain-containing protein | - |
| LV478_RS18595 (LV478_18610) | 15293..16069 | - | 777 | WP_275879438.1 | NYN domain-containing protein | - |
| LV478_RS18600 (LV478_18615) | 16072..16407 | - | 336 | WP_275879418.1 | hypothetical protein | - |
| LV478_RS18605 (LV478_18620) | 16782..17078 | + | 297 | WP_051672079.1 | WGR domain-containing protein | - |
| LV478_RS18610 (LV478_18625) | 17075..17710 | + | 636 | WP_176643954.1 | IS91 family transposase ISAzo26 | Transposase |
| LV478_RS18615 (LV478_18630) | 17799..18053 | + | 255 | WP_019092318.1 | ribbon-helix-helix domain-containing protein | - |
| LV478_RS18620 (LV478_18635) | 18057..18476 | + | 420 | WP_019092319.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| LV478_RS18625 (LV478_18640) | 18851..19504 | + | 654 | WP_019092320.1 | ParA family protein | - |
| LV478_RS18630 (LV478_18645) | 19501..19821 | + | 321 | WP_202898835.1 | hypothetical protein | - |
| LV478_RS18635 (LV478_18650) | 19818..20768 | + | 951 | WP_082770868.1 | replication initiator protein A | - |
| LV478_RS18640 (LV478_18655) | 21583..21762 | + | 180 | WP_019087453.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LV478_RS18645 (LV478_18660) | 21773..22189 | + | 417 | WP_010518062.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LV478_RS18650 (LV478_18665) | 22630..22875 | + | 246 | WP_029329817.1 | plasmid stabilization protein | - |
| LV478_RS18655 (LV478_18670) | 22872..23057 | + | 186 | WP_010518059.1 | PilT protein | - |
| LV478_RS18660 (LV478_18675) | 23081..23857 | + | 777 | WP_275879439.1 | hypothetical protein | - |
| LV478_RS18665 (LV478_18680) | 23950..24345 | + | 396 | WP_176644213.1 | DUF2442 domain-containing protein | - |
| LV478_RS18670 (LV478_18685) | 24583..24801 | + | 219 | WP_034931143.1 | antitoxin MazE family protein | Antitoxin Detail |
| LV478_RS18675 (LV478_18690) | 24798..25121 | + | 324 | WP_176644214.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LV478_RS18680 (LV478_18695) | 25151..25426 | - | 276 | WP_275879422.1 | hypothetical protein | - |
| LV478_RS18685 (LV478_18700) | 25475..25720 | + | 246 | WP_010518373.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| LV478_RS18690 (LV478_18705) | 25717..26103 | + | 387 | WP_025439964.1 | type II toxin-antitoxin system VapC family toxin | - |
| LV478_RS18695 (LV478_18710) | 26147..26431 | - | 285 | WP_275879440.1 | hypothetical protein | - |
| LV478_RS18700 (LV478_18715) | 26376..28208 | - | 1833 | WP_275879441.1 | phospholipase D family protein | - |
| LV478_RS18705 (LV478_18720) | 28460..28891 | - | 432 | WP_232276075.1 | hypothetical protein | - |
| LV478_RS18710 (LV478_18725) | 29344..29745 | - | 402 | Protein_38 | IS1380 family transposase ISNha3 | Transposase |
| LV478_RS18715 (LV478_18730) | 29857..30069 | + | 213 | WP_019092610.1 | DUF4160 domain-containing protein | - |
| LV478_RS18720 (LV478_18735) | 30053..30457 | + | 405 | WP_275879442.1 | DUF2442 domain-containing protein | - |
| LV478_RS18725 (LV478_18740) | 30691..31602 | + | 912 | WP_275879425.1 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein | - |
| LV478_RS18730 (LV478_18745) | 31962..32126 | - | 165 | WP_162838769.1 | hypothetical protein | - |
| LV478_RS18735 | 32281..32451 | + | 171 | WP_019087655.1 | hypothetical protein | - |
| LV478_RS18740 (LV478_18755) | 32591..32887 | + | 297 | WP_010518357.1 | BrnT family toxin | - |
| LV478_RS18745 (LV478_18760) | 32856..33197 | + | 342 | WP_007396313.1 | BrnA antitoxin family protein | - |
| LV478_RS18750 (LV478_18765) | 33499..34002 | - | 504 | WP_275879426.1 | MucR family transcriptional regulator | - |
| LV478_RS18755 (LV478_18770) | 33995..34261 | - | 267 | WP_275879427.1 | conjugal transfer protein TraD | - |
| LV478_RS18760 (LV478_18775) | 34326..34685 | - | 360 | WP_275879428.1 | conjugal transfer protein TraD | - |
| LV478_RS18765 (LV478_18780) | 34782..37802 | + | 3021 | WP_275879443.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| LV478_RS18770 (LV478_18785) | 37709..38158 | + | 450 | WP_275879444.1 | hypothetical protein | - |
| LV478_RS18775 (LV478_18790) | 38205..38627 | + | 423 | WP_007396294.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| LV478_RS18780 (LV478_18795) | 38624..38887 | + | 264 | WP_041250516.1 | toxin-antitoxin system HicB family antitoxin | - |
| LV478_RS18785 (LV478_18800) | 38973..39224 | + | 252 | WP_025439953.1 | plasmid stabilization protein | Antitoxin Detail |
| LV478_RS18790 (LV478_18805) | 39221..39643 | + | 423 | WP_110531928.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LV478_RS18795 (LV478_18810) | 39708..39902 | + | 195 | WP_010512461.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LV478_RS18800 (LV478_18815) | 39899..40291 | + | 393 | WP_007396299.1 | PIN domain nuclease | - |
| LV478_RS18805 (LV478_18820) | 40584..41252 | + | 669 | WP_275879446.1 | DUF6118 family protein | - |
| LV478_RS18810 (LV478_18825) | 41519..42160 | + | 642 | WP_275879430.1 | hypothetical protein | - |
| LV478_RS18815 (LV478_18830) | 42203..42610 | - | 408 | WP_039736219.1 | Rrf2 family transcriptional regulator | - |
| LV478_RS18820 (LV478_18835) | 42610..42879 | - | 270 | WP_225063301.1 | hypothetical protein | - |
| LV478_RS18825 (LV478_18840) | 43541..44173 | + | 633 | WP_275879431.1 | invasion associated locus B family protein | - |
| LV478_RS18830 (LV478_18845) | 44203..45636 | + | 1434 | WP_275879445.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| LV478_RS18835 (LV478_18850) | 45668..48595 | - | 2928 | WP_275879447.1 | Tn3 family transposase TnpA_ISAli20 | Transposase |
| LV478_RS18840 (LV478_18855) | 48783..48986 | + | 204 | Protein_64 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| LV478_RS18845 (LV478_18860) | 49326..50357 | - | 1032 | WP_275877899.1 | IS110 family transposase ISCc4 | Transposase |
| LV478_RS18850 (LV478_18865) | 50434..50817 | + | 384 | Protein_66 | Tn3 family transposase TnpR_ISMex38 | Transposase |
| LV478_RS18855 (LV478_18870) | 50814..51593 | + | 780 | WP_035979553.1 | DUF4019 domain-containing protein | - |
| LV478_RS18860 (LV478_18875) | 52888..53124 | + | 237 | WP_083824341.1 | DUF4160 domain-containing protein | - |
| LV478_RS18865 (LV478_18880) | 53114..53521 | + | 408 | WP_099542224.1 | DUF2442 domain-containing protein | - |
| LV478_RS18870 (LV478_18885) | 53835..54077 | + | 243 | WP_053324047.1 | BrnA antitoxin family protein | - |
| LV478_RS18875 (LV478_18890) | 54753..55004 | + | 252 | WP_275879406.1 | plasmid stabilization protein | Antitoxin Detail |
| LV478_RS18880 (LV478_18895) | 55001..55423 | + | 423 | WP_275879407.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LV478_RS18885 (LV478_18900) | 55629..56360 | - | 732 | WP_275879408.1 | SprT family zinc-dependent metalloprotease | - |
| LV478_RS18890 (LV478_18905) | 56360..59662 | - | 3303 | WP_275879409.1 | HsdR family type I site-specific deoxyribonuclease | - |
| LV478_RS18895 (LV478_18910) | 59693..60910 | - | 1218 | WP_275879410.1 | restriction endonuclease subunit S | - |
| LV478_RS18900 (LV478_18915) | 60900..62426 | - | 1527 | WP_275879411.1 | type I restriction-modification system subunit M | - |
| LV478_RS18905 (LV478_18920) | 62460..63041 | - | 582 | WP_275879412.1 | restriction endonuclease subunit S | - |
| LV478_RS18910 (LV478_18925) | 63311..64138 | + | 828 | WP_275879413.1 | hypothetical protein | - |
| LV478_RS18915 (LV478_18930) | 64122..64937 | + | 816 | WP_275879414.1 | hypothetical protein | - |
| LV478_RS18925 (LV478_18940) | 66306..66626 | - | 321 | WP_275879416.1 | Fic/DOC family N-terminal domain-containing protein | - |
| LV478_RS18930 (LV478_18945) | 67016..67792 | - | 777 | WP_275879417.1 | NYN domain-containing protein | - |
| LV478_RS18935 (LV478_18950) | 67795..68130 | - | 336 | WP_275879418.1 | hypothetical protein | - |
| LV478_RS18940 (LV478_18955) | 68505..68801 | + | 297 | WP_051672079.1 | WGR domain-containing protein | - |
| LV478_RS18945 (LV478_18960) | 68798..69432 | + | 635 | Protein_85 | tyrosine-type recombinase/integrase | - |
| LV478_RS18950 (LV478_18965) | 69521..69775 | + | 255 | WP_019092318.1 | ribbon-helix-helix domain-containing protein | - |
| LV478_RS18955 (LV478_18970) | 69779..70198 | + | 420 | WP_019092319.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| LV478_RS18960 (LV478_18975) | 70573..71226 | + | 654 | WP_019092320.1 | ParA family protein | - |
| LV478_RS18965 (LV478_18980) | 71539..72489 | + | 951 | WP_275879419.1 | replication initiator protein A | - |
| LV478_RS18970 (LV478_18985) | 73302..73481 | + | 180 | WP_019087453.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LV478_RS18975 (LV478_18990) | 73492..73908 | + | 417 | WP_010518062.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LV478_RS18980 (LV478_18995) | 74349..74594 | + | 246 | WP_029329817.1 | plasmid stabilization protein | - |
| LV478_RS18985 (LV478_19000) | 74591..74776 | + | 186 | WP_010518059.1 | PilT protein | - |
| LV478_RS18990 (LV478_19005) | 74839..75156 | + | 318 | WP_275879420.1 | hypothetical protein | - |
| LV478_RS18995 (LV478_19010) | 75050..75577 | + | 528 | WP_275879421.1 | hypothetical protein | - |
| LV478_RS19000 (LV478_19015) | 75670..76065 | + | 396 | WP_176644213.1 | DUF2442 domain-containing protein | - |
| LV478_RS19005 (LV478_19020) | 76303..76521 | + | 219 | WP_034931143.1 | antitoxin MazE family protein | Antitoxin Detail |
| LV478_RS19010 (LV478_19025) | 76518..76841 | + | 324 | WP_176644214.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LV478_RS19015 (LV478_19030) | 76871..77146 | - | 276 | WP_275879422.1 | hypothetical protein | - |
| LV478_RS19020 (LV478_19035) | 77195..77440 | + | 246 | WP_010518373.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| LV478_RS19025 (LV478_19040) | 77437..77823 | + | 387 | WP_025439964.1 | type II toxin-antitoxin system VapC family toxin | - |
| LV478_RS19030 (LV478_19045) | 77867..79927 | - | 2061 | WP_275879423.1 | phospholipase D family protein | - |
| LV478_RS19035 (LV478_19050) | 80179..80610 | - | 432 | WP_232276075.1 | hypothetical protein | - |
| LV478_RS19040 (LV478_19055) | 81064..81465 | - | 402 | Protein_104 | IS1380 family transposase ISNha3 | Transposase |
| LV478_RS19045 (LV478_19060) | 81577..81789 | + | 213 | WP_019092610.1 | DUF4160 domain-containing protein | - |
| LV478_RS19050 (LV478_19065) | 81773..82177 | + | 405 | WP_275879424.1 | DUF2442 domain-containing protein | - |
| LV478_RS19055 (LV478_19070) | 82411..83322 | + | 912 | WP_275879425.1 | 2-oxoglutarate and iron-dependent oxygenase domain-containing protein | - |
| LV478_RS19060 (LV478_19075) | 83681..83845 | - | 165 | WP_162838769.1 | hypothetical protein | - |
| LV478_RS19065 | 84000..84170 | + | 171 | WP_019087655.1 | hypothetical protein | - |
| LV478_RS19070 (LV478_19085) | 84310..84606 | + | 297 | WP_010518357.1 | BrnT family toxin | - |
| LV478_RS19075 (LV478_19090) | 84575..84916 | + | 342 | WP_007396313.1 | BrnA antitoxin family protein | - |
| LV478_RS19080 (LV478_19095) | 85218..85721 | - | 504 | WP_275879426.1 | MucR family transcriptional regulator | - |
| LV478_RS19085 (LV478_19100) | 85714..85980 | - | 267 | WP_275879427.1 | conjugal transfer protein TraD | - |
| LV478_RS19090 (LV478_19105) | 86045..86404 | - | 360 | WP_275879428.1 | conjugal transfer protein TraD | - |
| LV478_RS19095 (LV478_19110) | 86501..89878 | + | 3378 | WP_275879429.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| LV478_RS19100 (LV478_19115) | 89925..90347 | + | 423 | WP_007396294.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| LV478_RS19105 (LV478_19120) | 90344..90607 | + | 264 | WP_041250516.1 | toxin-antitoxin system HicB family antitoxin | - |
| LV478_RS19110 (LV478_19125) | 90693..90944 | + | 252 | WP_025439953.1 | plasmid stabilization protein | - |
| LV478_RS19115 (LV478_19130) | 90941..91364 | + | 424 | Protein_119 | type II toxin-antitoxin system VapC family toxin | - |
| LV478_RS19120 (LV478_19135) | 91429..91623 | + | 195 | WP_010512461.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| LV478_RS19125 (LV478_19140) | 91620..92012 | + | 393 | WP_007396299.1 | PIN domain nuclease | - |
| LV478_RS19130 (LV478_19145) | 92305..92973 | + | 669 | WP_275879446.1 | DUF6118 family protein | - |
| LV478_RS19135 (LV478_19150) | 93240..93881 | + | 642 | WP_275879430.1 | hypothetical protein | - |
| LV478_RS19140 (LV478_19155) | 93924..94331 | - | 408 | WP_039736219.1 | Rrf2 family transcriptional regulator | - |
| LV478_RS19145 (LV478_19160) | 94331..94600 | - | 270 | WP_225063301.1 | hypothetical protein | - |
| LV478_RS19150 (LV478_19165) | 95264..95896 | + | 633 | WP_275879431.1 | invasion associated locus B family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|