MGE detailed information
MGE type: Genomic_island MGE length: 14716 bp
Accession: NZ_CP081009 Location: 2050346..2065061 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Accession: NZ_CP081009 Location: 2050346..2065061 Organism: Escherichia coli strain Stbl4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K3830_RS09710 (2045548) | 2045548..2046075 | - | 528 | WP_000108330.1 | gluconokinase | - |
| K3830_RS09715 (2046214) | 2046214..2047209 | - | 996 | WP_000730252.1 | gluconate operon transcriptional repressor GntR | - |
| K3830_RS09720 (2047433) | 2047433..2048128 | - | 696 | WP_000639812.1 | quercetin 2,3-dioxygenase | - |
| K3830_RS09725 (2048251) | 2048251..2049288 | - | 1038 | WP_000236293.1 | oxidoreductase | - |
| K3830_RS09730 (2049621) | 2049621..2050109 | + | 489 | WP_012775970.1 | N-acetyltransferase | - |
| K3830_RS09735 (2050346) | 2050346..2051524 | + | 1179 | WP_000065894.1 | Major exported protein | VF |
| K3830_RS09740 (2051521) | 2051521..2051937 | + | 417 | WP_000988497.1 | YrhA family protein | - |
| K3830_RS09750 (2052073) | 2052073..2053062 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| K3830_RS09755 (2053161) | 2053161..2054099 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| K3830_RS09760 (2054414) | 2054414..2054632 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| K3830_RS09765 (2054888) | 2054888..2055427 | + | 540 | WP_000675733.1 | protein YhaB | - |
| K3830_RS09770 (2055449) | 2055449..2056636 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| K3830_RS09780 (2057885) | 2057885..2059030 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| K3830_RS09785 (2059127) | 2059127..2060017 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| K3830_RS09790 (2060047) | 2060047..2060817 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| K3830_RS09795 (2060833) | 2060833..2062167 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| K3830_RS09800 (2062542) | 2062542..2064113 | + | 1572 | WP_001273747.1 | galactarate dehydratase | - |
| K3830_RS09805 (2064262) | 2064262..2064597 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| K3830_RS09810 (2064597) | 2064597..2065061 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| K3830_RS09815 (2065116) | 2065116..2065925 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| K3830_RS09820 (2066174) | 2066174..2067454 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| K3830_RS09825 (2067477) | 2067477..2067950 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| K3830_RS09830 (2067961) | 2067961..2068332 | + | 372 | Protein_1937 | PTS sugar transporter subunit IIC | - |
| K3830_RS09835 (2068328) | 2068328..2068885 | + | 558 | Protein_1938 | amidohydrolase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20042 | CP009789 | 3247092..3263092 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.006 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.006 |