MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_CP069710 Location: 2362501..2374070 Organism: Escherichia coli strain EA2 Replicon: chromosome
Accession: NZ_CP069710 Location: 2362501..2374070 Organism: Escherichia coli strain EA2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JSQ74_RS11325 () | 2358826..2360034 | - | 1209 | WP_001295545.1 | propionate kinase | - |
| JSQ74_RS11330 () | 2360060..2361391 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| JSQ74_RS11335 () | 2361413..2362402 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JSQ74_RS11340 () | 2362501..2363439 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JSQ74_RS11345 () | 2363628..2363972 | + | 345 | WP_112017454.1 | transcriptional activator TdcR | - |
| JSQ74_RS11350 () | 2364228..2364767 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| JSQ74_RS11355 () | 2364789..2365892 | + | 1104 | WP_115191338.1 | YhaC family protein | - |
| JSQ74_RS11365 () | 2366894..2368039 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| JSQ74_RS11370 () | 2368136..2369026 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JSQ74_RS11375 () | 2369056..2369826 | - | 771 | WP_021564856.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JSQ74_RS11380 () | 2369842..2371176 | - | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JSQ74_RS11385 () | 2371551..2373122 | + | 1572 | WP_096261350.1 | galactarate dehydratase | - |
| JSQ74_RS11390 () | 2373271..2373606 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JSQ74_RS11395 () | 2373606..2374070 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JSQ74_RS11400 () | 2374125..2374934 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| JSQ74_RS11405 () | 2375183..2376463 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JSQ74_RS11410 () | 2376486..2376959 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JSQ74_RS11415 () | 2376970..2377749 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| JSQ74_RS11420 () | 2377739..2378617 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| JSQ74_RS11425 () | 2378635..2379069 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.007 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.007 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.007 |