MGE detailed information
MGE type: Genomic_island MGE length: 11675 bp
Accession: NZ_CP063511 Location: 1725892..1737566 Organism: Escherichia coli strain EH08-18-36 Replicon: chromosome
Accession: NZ_CP063511 Location: 1725892..1737566 Organism: Escherichia coli strain EH08-18-36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS18_RS08310 () | 1720893..1721327 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| IQS18_RS08315 () | 1721345..1722223 | - | 879 | WP_001300474.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| IQS18_RS08320 () | 1722213..1722992 | - | 780 | WP_203024061.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| IQS18_RS08325 () | 1723003..1723476 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IQS18_RS08330 () | 1723499..1724779 | - | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IQS18_RS08335 () | 1725028..1725837 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IQS18_RS08340 () | 1725892..1726356 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IQS18_RS08345 () | 1726356..1726691 | - | 336 | WP_021547164.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IQS18_RS08350 () | 1726840..1728411 | - | 1572 | WP_203024062.1 | galactarate dehydratase | - |
| IQS18_RS08355 () | 1728786..1730120 | + | 1335 | WP_000599651.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IQS18_RS08360 () | 1730136..1730906 | + | 771 | WP_053270423.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IQS18_RS08365 () | 1730936..1731826 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IQS18_RS08370 () | 1731923..1733068 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| IQS18_RS08380 () | 1734091..1735278 | - | 1188 | WP_021547163.1 | YhaC family protein | - |
| IQS18_RS08385 () | 1735300..1735839 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| IQS18_RS08390 () | 1736095..1736439 | - | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| IQS18_RS08395 () | 1736628..1737566 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IQS18_RS08400 () | 1737665..1738654 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IQS18_RS08405 () | 1738676..1740007 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| IQS18_RS08410 () | 1740033..1741241 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.007 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.007 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.007 |