MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 137079 bp
Accession: NZ_CP058791 Location: 1..137079 Organism: Shigella flexneri strain STLIN_6 Replicon: plasmid unnamed1
Accession: NZ_CP058791 Location: 1..137079 Organism: Shigella flexneri strain STLIN_6 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HZT08_RS23365 (1) | 1..978 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| HZT08_RS23370 (1257) | 1257..1997 | - | 741 | WP_001066937.1 | site-specific integrase | - |
| HZT08_RS23375 (2118) | 2118..2279 | - | 162 | WP_063074630.1 | hypothetical protein | - |
| HZT08_RS23380 (2332) | 2332..2682 | + | 351 | WP_032215349.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| HZT08_RS23385 (2920) | 2920..3795 | + | 876 | WP_000879139.1 | CDF family zinc transporter ZitB | - |
| HZT08_RS23390 (4294) | 4294..4536 | + | 243 | WP_000470771.1 | hypothetical protein | - |
| HZT08_RS23395 (4760) | 4760..5565 | + | 806 | WP_171763699.1 | IS5 family transposase ISPrst3 | Transposase |
| HZT08_RS23400 (5554) | 5554..5724 | - | 171 | WP_240766708.1 | hypothetical protein | - |
| HZT08_RS23410 (6830) | 6830..7243 | + | 414 | WP_225376418.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HZT08_RS23415 (7400) | 7400..7933 | + | 534 | WP_032235482.1 | Major MR/P fimbria protein | VF |
| HZT08_RS23420 (8011) | 8011..8969 | + | 959 | Protein_10 | Outer membrane usher protein FimD | VF |
| HZT08_RS23425 (9129) | 9129..9386 | + | 258 | Protein_11 | IS3 family transposase IS911 | Transposase |
| HZT08_RS23430 (9399) | 9399..9530 | - | 132 | Protein_12 | IS3 family transposase IS911 | Transposase |
| HZT08_RS23435 (9573) | 9573..10052 | - | 480 | Protein_13 | IS3 family transposase IS629 | Transposase |
| HZT08_RS23440 (10136) | 10136..11644 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HZT08_RS23445 (12317) | 12317..13056 | - | 740 | Protein_15 | IS3 family transposase IS1203 | Transposase |
| HZT08_RS23450 (13111) | 13111..14133 | - | 1023 | Protein_16 | IS30 family transposase IS30D | Transposase |
| HZT08_RS23455 (14130) | 14130..14210 | - | 81 | Protein_17 | hypothetical protein | - |
| HZT08_RS23460 (14198) | 14198..14623 | + | 426 | Protein_18 | IS3 family transposase | - |
| HZT08_RS23465 (15296) | 15296..16804 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| HZT08_RS23470 (16885) | 16885..17361 | + | 477 | Protein_20 | IS3 family transposase ISEhe3 | Transposase |
| HZT08_RS23475 (17387) | 17387..17734 | + | 348 | WP_000612552.1 | IS66 family transposase ISKpn24 | Transposase |
| HZT08_RS23480 (17784) | 17784..17972 | + | 189 | Protein_22 | IS66 family transposase ISEc8 | Transposase |
| HZT08_RS23485 (18178) | 18178..19532 | + | 1355 | Protein_23 | IS66 family transposase ISSgsp1 | Transposase |
| HZT08_RS23490 (19976) | 19976..20257 | + | 282 | WP_001375145.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HZT08_RS23495 (20370) | 20370..20630 | + | 261 | WP_032215356.1 | Major pilu subunit operon regulatory protein PapB | VF |
| HZT08_RS23500 (20773) | 20773..21318 | + | 546 | WP_240766710.1 | hypothetical protein | VF |
| HZT08_RS23505 (21352) | 21352..23736 | + | 2385 | WP_240766712.1 | Outer membrane usher protein YraJ | VF |
| HZT08_RS23510 (23729) | 23729..24415 | + | 687 | WP_001031857.1 | Chaperone protein FaeE | VF |
| HZT08_RS23515 (24415) | 24415..25416 | + | 1002 | WP_240766714.1 | protein fanF | - |
| HZT08_RS23520 (25416) | 25416..25940 | + | 525 | WP_000737845.1 | spore coat protein U domain-containing protein | - |
| HZT08_RS23525 (25933) | 25933..26460 | + | 528 | WP_000592915.1 | hypothetical protein | - |
| HZT08_RS23530 (26621) | 26621..27117 | + | 497 | Protein_32 | tyrosine-type recombinase/integrase | - |
| HZT08_RS23535 (27310) | 27310..27579 | + | 270 | WP_000114669.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| HZT08_RS23540 (27583) | 27583..28113 | + | 531 | WP_000348879.1 | GNAT family N-acetyltransferase | Toxin Detail |
| HZT08_RS23545 (28595) | 28595..29292 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| HZT08_RS23550 (29396) | 29396..29614 | - | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| HZT08_RS23560 (31002) | 31002..31322 | - | 321 | Protein_38 | Tn3 family transposase | - |
| HZT08_RS23565 (31536) | 31536..32294 | + | 759 | WP_001257942.1 | hypothetical protein | VF |
| HZT08_RS23570 (33174) | 33174..34031 | - | 858 | WP_000130970.1 | incFII family plasmid replication initiator RepA | - |
| HZT08_RS24445 (34024) | 34024..34098 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| HZT08_RS23585 (34344) | 34344..34592 | - | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| HZT08_RS23590 (34876) | 34876..35025 | - | 150 | WP_001367749.1 | Hok/Gef family protein | Toxin Detail |
| - (35069) | 35069..35130 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (35069) | 35069..35130 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (35069) | 35069..35130 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (35069) | 35069..35130 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| HZT08_RS23595 (35389) | 35389..35631 | - | 243 | WP_000504693.1 | hypothetical protein | - |
| HZT08_RS23600 (35710) | 35710..36407 | + | 698 | WP_103215986.1 | IS1 family transposase IS1S | Transposase |
| HZT08_RS23605 (37186) | 37186..37389 | - | 204 | WP_001375146.1 | hypothetical protein | - |
| HZT08_RS23610 (37544) | 37544..38101 | - | 558 | WP_000139319.1 | fertility inhibition protein FinO | - |
| HZT08_RS23615 (38204) | 38204..39064 | - | 861 | WP_000868986.1 | putative protein YcjY | VF |
| HZT08_RS23620 (39123) | 39123..39869 | - | 747 | WP_000205750.1 | conjugal transfer pilus acetylase TraX | - |
| HZT08_RS23625 (39889) | 39889..45159 | - | 5271 | WP_215284613.1 | Multifunctional conjugation protein TraI | Relaxase |
| HZT08_RS23630 (45241) | 45241..45468 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| HZT08_RS23635 (45468) | 45468..45866 | + | 399 | WP_000911314.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZT08_RS23640 (45875) | 45875..48028 | - | 2154 | WP_240766716.1 | type IV conjugative transfer system coupling protein TraD | - |
| HZT08_RS23645 (48281) | 48281..49012 | - | 732 | WP_000850426.1 | conjugal transfer complement resistance protein TraT | - |
| HZT08_RS23650 (49026) | 49026..49535 | - | 510 | WP_000628103.1 | conjugal transfer entry exclusion protein TraS | - |
| HZT08_RS23655 (49532) | 49532..51372 | - | 1841 | Protein_56 | conjugal transfer mating-pair stabilization protein TraG | - |
| HZT08_RS23665 (52637) | 52637..53617 | - | 981 | Protein_58 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| HZT08_RS23670 (53614) | 53614..54987 | - | 1374 | WP_000488446.1 | conjugal transfer pilus assembly protein TraH | - |
| HZT08_RS23675 (54987) | 54987..55367 | - | 381 | WP_001375155.1 | F-type conjugal transfer protein TrbF | - |
| HZT08_RS23680 (55354) | 55354..55695 | - | 342 | WP_012477176.1 | P-type conjugative transfer protein TrbJ | - |
| HZT08_RS23685 (55625) | 55625..56170 | - | 546 | WP_000059835.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HZT08_RS23690 (56157) | 56157..56441 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HZT08_RS23695 (56522) | 56522..56836 | + | 315 | WP_000415566.1 | protein ArtA | - |
| HZT08_RS23700 (56838) | 56838..57185 | - | 348 | WP_001287908.1 | conjugal transfer protein TrbA | - |
| HZT08_RS23705 (57201) | 57201..57944 | - | 744 | WP_001030388.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HZT08_RS23710 (57937) | 57937..58194 | - | 258 | WP_000864346.1 | conjugal transfer protein TrbE | - |
| HZT08_RS23715 (58221) | 58221..60029 | - | 1809 | WP_240766718.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HZT08_RS23720 (60026) | 60026..60664 | - | 639 | WP_000777698.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HZT08_RS23725 (60673) | 60673..61665 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| HZT08_RS23730 (61662) | 61662..62294 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HZT08_RS23735 (62291) | 62291..62677 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| HZT08_RS23740 (62674) | 62674..62991 | - | 318 | Protein_73 | hypothetical protein | - |
| HZT08_RS23745 (63307) | 63307..63584 | + | 278 | Protein_74 | hypothetical protein | - |
| HZT08_RS23750 (63885) | 63885..64010 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| HZT08_RS23755 (63952) | 63952..64101 | - | 150 | Protein_76 | DUF5431 family protein | - |
| - (64108) | 64108..64306 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (64108) | 64108..64306 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (64108) | 64108..64306 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (64108) | 64108..64306 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| HZT08_RS23760 (64275) | 64275..65037 | - | 763 | Protein_77 | plasmid SOS inhibition protein A | - |
| HZT08_RS23765 (65034) | 65034..65468 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| HZT08_RS23770 (65523) | 65523..67481 | - | 1959 | WP_000117171.1 | ParB/RepB/Spo0J family partition protein | - |
| HZT08_RS23775 (67547) | 67547..67780 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| HZT08_RS23780 (67837) | 67837..68370 | - | 534 | WP_240766720.1 | single-stranded DNA-binding protein | - |
| HZT08_RS23785 (69167) | 69167..69358 | - | 192 | WP_001493747.1 | hypothetical protein | - |
| HZT08_RS23790 (69358) | 69358..69777 | - | 420 | WP_001493748.1 | DUF1380 family protein | - |
| HZT08_RS23795 (69824) | 69824..70249 | - | 426 | WP_001495383.1 | antirestriction protein | - |
| HZT08_RS23800 (70665) | 70665..71435 | - | 771 | WP_001747319.1 | hypothetical protein | - |
| HZT08_RS23805 (71480) | 71480..71998 | - | 519 | WP_225388634.1 | DUF1380 family protein | - |
| HZT08_RS23810 (71928) | 71928..72149 | - | 222 | WP_089669800.1 | hypothetical protein | - |
| HZT08_RS23815 (72150) | 72150..72833 | - | 684 | WP_000085939.1 | DNA methylase | - |
| HZT08_RS23820 (72910) | 72910..73215 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| HZT08_RS23825 (73229) | 73229..74103 | - | 875 | Protein_90 | DUF1281 domain-containing protein | - |
| HZT08_RS23830 (74841) | 74841..75812 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HZT08_RS23835 (75812) | 75812..76978 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| HZT08_RS23840 (77566) | 77566..78006 | - | 441 | Protein_93 | RepB family plasmid replication initiator protein | - |
| HZT08_RS23845 (78098) | 78098..79326 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| HZT08_RS23850 (79331) | 79331..79657 | - | 327 | Protein_95 | RepB family plasmid replication initiator protein | - |
| HZT08_RS23855 (80379) | 80379..81185 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HZT08_RS23860 (81186) | 81186..81491 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HZT08_RS23865 (81493) | 81493..81711 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HZT08_RS23870 (82419) | 82419..83414 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| HZT08_RS23875 (83418) | 83418..84350 | + | 933 | WP_000991831.1 | S-4TM family putative pore-forming effector | - |
| HZT08_RS23880 (84648) | 84648..85736 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| HZT08_RS23885 (85738) | 85738..85893 | + | 156 | WP_240766700.1 | hypothetical protein | - |
| HZT08_RS23890 (85963) | 85963..87171 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| HZT08_RS23895 (87184) | 87184..87945 | + | 762 | WP_240766702.1 | hypothetical protein | - |
| HZT08_RS23900 (88002) | 88002..89567 | - | 1566 | WP_000741348.1 | AAA family ATPase | - |
| HZT08_RS23905 (89859) | 89859..92978 | - | 3120 | WP_000467135.1 | hypothetical protein | - |
| HZT08_RS23910 (93284) | 93284..93514 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| HZT08_RS23915 (93511) | 93511..93927 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HZT08_RS23920 (94089) | 94089..96227 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| HZT08_RS23925 (96581) | 96581..96838 | + | 258 | WP_000371887.1 | hypothetical protein | - |
| HZT08_RS23930 (96838) | 96838..97428 | + | 591 | WP_000194548.1 | hypothetical protein | - |
| HZT08_RS23935 (97446) | 97446..97793 | - | 348 | WP_000142443.1 | DUF6404 family protein | - |
| HZT08_RS23940 (97922) | 97922..98257 | + | 336 | WP_057698418.1 | colicin E1 family microcin immunity protein | - |
| HZT08_RS23945 (98279) | 98279..98764 | - | 486 | Protein_114 | colicin Ia central receptor-binding domain-containing protein | - |
| HZT08_RS23950 (98880) | 98880..99032 | - | 153 | Protein_115 | IS3 family transposase ISEcl1 | Transposase |
| HZT08_RS23955 (99138) | 99138..99503 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| HZT08_RS23960 (99503) | 99503..100690 | + | 1188 | WP_240766722.1 | IS91 family transposase IS91 | Transposase |
| HZT08_RS23965 (100967) | 100967..101332 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| HZT08_RS23970 (101332) | 101332..102519 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| HZT08_RS23975 (103305) | 103305..103388 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| HZT08_RS23980 (103543) | 103543..104187 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| HZT08_RS23985 (104568) | 104568..105230 | + | 663 | WP_000516400.1 | division plane positioning ATPase MipZ | - |
| HZT08_RS23990 (105328) | 105328..105609 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| HZT08_RS24000 (106758) | 106758..107387 | + | 630 | WP_240766704.1 | hypothetical protein | - |
| HZT08_RS24005 (107384) | 107384..107740 | - | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| HZT08_RS24010 (107877) | 107877..108323 | - | 447 | WP_000057426.1 | hypothetical protein | - |
| HZT08_RS24015 (108363) | 108363..109199 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| HZT08_RS24020 (110433) | 110433..110684 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| HZT08_RS24025 (110674) | 110674..110955 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HZT08_RS24030 (111101) | 111101..111424 | + | 324 | WP_001181907.1 | hypothetical protein | - |
| HZT08_RS24035 (111469) | 111469..111714 | + | 246 | WP_000356545.1 | hypothetical protein | - |
| HZT08_RS24040 (111704) | 111704..111919 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| HZT08_RS24045 (112308) | 112308..113495 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| HZT08_RS24050 (113495) | 113495..113860 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| HZT08_RS24055 (114137) | 114137..114697 | - | 561 | Protein_136 | IS91 family transposase IS91 | Transposase |
| HZT08_RS24060 (115288) | 115288..115629 | - | 342 | Protein_137 | IS3 family transposase | - |
| HZT08_RS24065 (115707) | 115707..117143 | - | 1437 | WP_240766706.1 | Hemolysin secretion protein D, plasmid | VF |
| HZT08_RS24070 (117162) | 117162..119285 | - | 2124 | WP_000376539.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| HZT08_RS24075 (119357) | 119357..122431 | - | 3075 | WP_039022831.1 | Hemolysin, plasmid | VF |
| HZT08_RS24080 (122443) | 122443..122955 | - | 513 | WP_001372478.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| HZT08_RS24085 (123438) | 123438..124666 | - | 1229 | Protein_142 | IS3 family transposase | - |
| HZT08_RS24095 (126565) | 126565..127752 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| HZT08_RS24100 (127752) | 127752..128117 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| HZT08_RS24105 (128540) | 128540..129013 | - | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| HZT08_RS24450 (129804) | 129804..129899 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| HZT08_RS24110 (130352) | 130352..130774 | - | 423 | WP_001398192.1 | hypothetical protein | - |
| HZT08_RS24115 (130946) | 130946..131209 | - | 264 | WP_000063165.1 | hypothetical protein | - |
| HZT08_RS24120 (131348) | 131348..132760 | - | 1413 | Protein_150 | DNA topoisomerase | - |
| HZT08_RS24125 (132842) | 132842..133207 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| HZT08_RS24130 (133207) | 133207..134394 | + | 1188 | WP_240766722.1 | IS91 family transposase IS91 | Transposase |
| HZT08_RS24135 (134583) | 134583..134726 | - | 144 | Protein_153 | IS3 family transposase | - |
| HZT08_RS24140 (134839) | 134839..135879 | - | 1041 | WP_000952515.1 | hypothetical protein | - |
| HZT08_RS24145 (136075) | 136075..136406 | - | 332 | Protein_155 | IS3 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|