NZ_CP0493491..194391

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 194391 bp
Accession: NZ_CP049349        Location: 1..194391         Organism: Escherichia coli strain 3R       Replicon: plasmid p3R-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G6Q95_RS23130 () 92..716 - 625 Protein_1 type-F conjugative transfer system protein TraW -
G6Q95_RS23135 () 718..1125 - 408 Protein_2 type-F conjugative transfer system protein TrbI -
G6Q95_RS25510 () 1100..3726 - 2627 Protein_3 type IV secretion system protein TraC -
G6Q95_RS23150 () 3886..4107 - 222 WP_001278690.1 conjugal transfer protein TraR -
G6Q95_RS23155 () 4242..4757 - 516 WP_000809834.1 type IV conjugative transfer system lipoprotein TraV -
G6Q95_RS23160 () 4754..5005 - 252 WP_001038351.1 conjugal transfer protein TrbG -
G6Q95_RS23165 () 5017..5247 - 231 WP_001352845.1 conjugal transfer protein TrbD -
G6Q95_RS23170 () 5201..5791 - 591 WP_000002787.1 conjugal transfer protein TraP -
G6Q95_RS23175 () 5781..7206 - 1426 Protein_9 conjugal transfer protein TraB -
G6Q95_RS23180 () 7206..7910 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
G6Q95_RS23185 () 7921..8487 - 567 WP_000399774.1 type IV conjugative transfer system protein TraE -
G6Q95_RS23190 () 8509..8820 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
G6Q95_RS23195 () 8835..9200 - 366 WP_000340270.1 type IV conjugative transfer system pilin TraA -
G6Q95_RS23200 () 9234..9461 - 228 WP_001254386.1 conjugal transfer relaxosome protein TraY -
G6Q95_RS23205 () 9555..10241 - 687 WP_001825184.1 PAS domain-containing protein -
G6Q95_RS23210 () 10432..10815 - 384 WP_000124981.1 relaxosome protein TraM -
G6Q95_RS23215 () 11092..11739 + 648 WP_001825185.1 transglycosylase SLT domain-containing protein -
G6Q95_RS23220 () 12036..12857 - 822 WP_001234469.1 DUF945 domain-containing protein -
G6Q95_RS23225 () 13035..13648 + 614 Protein_19 hypothetical protein -
G6Q95_RS23230 () 13886..14047 - 162 WP_001332444.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 14100..14311 - 212 NuclAT_0 - Antitoxin Detail
- () 14100..14311 - 212 NuclAT_0 - Antitoxin Detail
- () 14100..14311 - 212 NuclAT_0 - Antitoxin Detail
- () 14100..14311 - 212 NuclAT_0 - Antitoxin Detail
G6Q95_RS23235 () 14322..15041 - 720 WP_001276275.1 plasmid SOS inhibition protein A -
G6Q95_RS23240 () 15038..15472 - 435 WP_000845935.1 conjugation system SOS inhibitor PsiB -
G6Q95_RS23245 () 15527..17485 - 1959 Protein_23 ParB/RepB/Spo0J family partition protein -
G6Q95_RS23250 () 17544..17777 - 234 WP_001209608.1 DUF905 domain-containing protein -
G6Q95_RS23255 () 17840..18337 - 498 WP_050427786.1 single-stranded DNA-binding protein -
G6Q95_RS23260 () 18989..19686 + 698 Protein_26 IS1 family transposase -
G6Q95_RS23265 () 19743..20966 - 1224 WP_001696651.1 tyrosine-type recombinase/integrase -
G6Q95_RS23270 () 21043..21954 - 912 WP_001442123.1 hypothetical protein -
G6Q95_RS23275 () 21951..22949 - 999 WP_000549075.1 site-specific integrase -
G6Q95_RS23280 () 23012..24157 + 1146 Protein_30 translesion error-prone DNA polymerase V subunit UmuC -
G6Q95_RS23285 () 24294..25265 - 972 WP_001233385.1 ParB/RepB/Spo0J family partition protein -
G6Q95_RS23290 () 25262..26467 - 1206 WP_001442122.1 AAA family ATPase -
G6Q95_RS23295 () 27088..27819 + 732 WP_000504262.1 replication initiation protein -
G6Q95_RS23300 () 28499..29305 - 807 WP_000016968.1 site-specific integrase -
G6Q95_RS23305 () 29306..29611 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
G6Q95_RS23310 () 29613..29831 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
G6Q95_RS23315 () 30397..30909 + 513 WP_000151784.1 hypothetical protein -
G6Q95_RS23320 () 30943..32076 - 1134 WP_000545987.1 DUF3800 domain-containing protein -
G6Q95_RS23325 () 32243..33016 - 774 WP_000905949.1 hypothetical protein -
G6Q95_RS23330 () 33029..33529 - 501 WP_000528932.1 hypothetical protein -
G6Q95_RS23335 () 33794..34024 + 231 WP_001261278.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
G6Q95_RS23340 () 34021..34437 + 417 WP_001034046.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
G6Q95_RS23345 () 34482..38276 - 3795 WP_001144732.1 hypothetical protein -
G6Q95_RS23350 () 38657..38887 + 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
G6Q95_RS23355 () 38884..39300 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
G6Q95_RS23360 () 39375..40940 + 1566 WP_001128474.1 AAA family ATPase -
G6Q95_RS23365 () 40925..41947 + 1023 WP_032174242.1 helicase UvrD -
G6Q95_RS23370 () 42201..42898 - 698 Protein_48 IS1 family transposase -
G6Q95_RS23375 () 43278..45479 - 2202 WP_000973519.1 ferric aerobactin receptor IutA -
G6Q95_RS23380 () 45561..46838 - 1278 WP_000750130.1 NADPH-dependent L-lysine N(6)-monooxygenase -
G6Q95_RS23385 () 46835..48577 - 1743 WP_001015721.1 aerobactin synthase IucC -
G6Q95_RS23390 () 48577..49524 - 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase -
G6Q95_RS23395 () 49525..51249 - 1725 WP_000602863.1 aerobactin synthase IucA -
G6Q95_RS23400 () 51385..52578 + 1194 WP_000095527.1 MFS transporter -
G6Q95_RS23405 () 52958..53338 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
G6Q95_RS23410 () 53679..54092 - 414 Protein_56 phosphopyruvate hydratase -
G6Q95_RS23415 () 54090..54347 + 258 Protein_57 Tn3 family transposase -
G6Q95_RS23420 () 54581..55438 - 858 WP_000968140.1 iron/manganese ABC transporter permease subunit SitD -
G6Q95_RS23425 () 55435..56292 - 858 WP_000992806.1 iron/manganese ABC transporter permease subunit SitC -
G6Q95_RS23430 () 56289..57116 - 828 WP_000983710.1 iron/manganese ABC transporter ATP-binding protein SitB -
G6Q95_RS23435 () 57116..58030 - 915 WP_000949004.1 iron/manganese ABC transporter substrate-binding protein SitA -
G6Q95_RS23440 () 58386..59083 + 698 Protein_62 IS1 family transposase -
G6Q95_RS23445 () 59263..59776 - 514 Protein_63 DUF4113 domain-containing protein -
G6Q95_RS25515 () 59837..59941 - 105 Protein_64 AAA family ATPase -
G6Q95_RS23450 () 59943..60266 - 324 Protein_65 helix-turn-helix domain-containing protein -
G6Q95_RS23455 () 61012..61989 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
G6Q95_RS23460 () 62274..63014 - 741 WP_001066954.1 tyrosine-type recombinase/integrase -
G6Q95_RS23465 () 63135..63323 - 189 WP_014640565.1 hypothetical protein -
G6Q95_RS23470 () 63697..64599 - 903 WP_001312822.1 antimicrobial resistance protein Mig-14 -
G6Q95_RS23475 () 64668..65777 - 1110 WP_001696610.1 SDR family oxidoreductase -
G6Q95_RS23480 () 66209..67162 - 954 WP_000280980.1 omptin family outer membrane protease -
G6Q95_RS23485 () 68435..68851 - 417 WP_001595315.1 IS3 family transposase -
G6Q95_RS23495 () 71438..72625 + 1188 WP_001696612.1 efflux RND transporter periplasmic adaptor subunit -
G6Q95_RS23500 () 72622..74562 + 1941 WP_001610286.1 MacB family efflux pump subunit -
G6Q95_RS23505 () 74566..75936 + 1371 WP_001696614.1 efflux transporter outer membrane subunit -
G6Q95_RS23510 () 76267..77580 + 1314 Protein_77 IS4 family transposase -
G6Q95_RS23515 () 78332..79108 + 777 WP_001610297.1 hypothetical protein -
G6Q95_RS23520 () 79110..81374 + 2265 WP_001610298.1 UvrD-helicase domain-containing protein -
G6Q95_RS23525 () 81625..81729 + 105 Protein_80 transposase -
G6Q95_RS23530 () 82135..83480 - 1346 Protein_81 ISNCY family transposase -
G6Q95_RS23535 () 83716..84087 - 372 WP_072645713.1 hypothetical protein -
G6Q95_RS23540 () 84130..84597 - 468 WP_001610303.1 hypothetical protein -
G6Q95_RS23545 () 84597..84866 - 270 WP_001610304.1 hypothetical protein -
G6Q95_RS23550 () 85098..86495 - 1398 WP_001610305.1 ISNCY family transposase -
G6Q95_RS23555 () 86803..86952 - 150 Protein_86 IS3 family transposase -
G6Q95_RS23560 () 87130..88323 - 1194 WP_000450494.1 GTP-binding protein -
G6Q95_RS23565 () 88702..89909 + 1208 WP_085948175.1 IS3-like element ISEc48 family transposase -
G6Q95_RS23575 () 92054..92347 + 294 WP_000738422.1 increased serum survival lipoprotein Iss -
G6Q95_RS23580 () 92405..92546 - 142 Protein_91 lysis protein -
G6Q95_RS23585 () 93157..94256 + 1100 Protein_92 transposase -
G6Q95_RS23590 () 95492..96607 + 1116 WP_001318220.1 salmochelin biosynthesis C-glycosyltransferase IroB -
G6Q95_RS23595 () 96747..100406 + 3660 WP_001442133.1 salmochelin/enterobactin export ABC transporter IroC -
G6Q95_RS23600 () 100510..101739 + 1230 WP_000933675.1 catecholate siderophore esterase IroD -
G6Q95_RS23605 () 101824..102780 + 957 WP_000271277.1 catecholate siderophore esterase IroE -
G6Q95_RS23610 () 102825..105002 - 2178 WP_001222186.1 siderophore salmochelin receptor IroN -
G6Q95_RS23625 () 106502..106744 - 243 WP_072195677.1 colicin V immunity protein -
G6Q95_RS23630 () 106905..107682 + 778 Protein_100 Gfo/Idh/MocA family oxidoreductase -
G6Q95_RS23635 () 107684..107953 + 270 WP_000379710.1 SemiSWEET transporter -
G6Q95_RS23640 () 107950..108930 + 981 WP_001017347.1 NAD(P)-binding domain-containing protein -
G6Q95_RS23645 () 109006..109386 + 381 WP_001171554.1 IS66 family insertion sequence hypothetical protein -
G6Q95_RS23650 () 109383..109730 + 348 WP_000612591.1 IS66 family insertion sequence element accessory protein TnpB -
G6Q95_RS23655 () 109780..111054 + 1275 Protein_105 IS66 family transposase -
G6Q95_RS23660 () 111094..111360 + 267 Protein_106 resolvase -
G6Q95_RS23665 () 111458..112480 + 1023 WP_000156886.1 IS110 family transposase -
G6Q95_RS23670 () 112770..113161 - 392 Protein_108 peptide deformylase -
G6Q95_RS23675 () 113270..117403 - 4134 WP_001696784.1 hemoglobin-binding protease autotransporter Hbp -
G6Q95_RS23680 () 117571..117764 + 194 Protein_110 IS91 family transposase -
G6Q95_RS23685 () 117735..117950 - 216 Protein_111 helix-turn-helix transcriptional regulator -
G6Q95_RS23690 () 117959..119171 - 1213 Protein_112 IS3 family transposase -
G6Q95_RS23695 () 119355..119612 + 258 Protein_113 IS3 family transposase -
G6Q95_RS23700 () 119680..120831 + 1152 WP_021514811.1 IS30-like element IS30 family transposase -
G6Q95_RS23705 () 120953..121318 + 366 WP_000124098.1 hypothetical protein -
G6Q95_RS23710 () 121318..121580 + 263 Protein_116 transposase zinc-binding domain-containing protein -
G6Q95_RS23715 () 121785..122795 + 1011 WP_000487120.1 IS110 family transposase -
G6Q95_RS23720 () 123373..123963 + 591 WP_000086538.1 recombinase family protein -
G6Q95_RS23725 () 124010..124168 + 159 Protein_119 transposase -
G6Q95_RS23730 () 124318..125316 + 999 WP_000756335.1 ABC transporter substrate-binding protein -
G6Q95_RS23735 () 125316..126353 + 1038 WP_000110581.1 iron ABC transporter permease -
G6Q95_RS23740 () 126353..127114 + 762 WP_000020503.1 ABC transporter ATP-binding protein -
G6Q95_RS23745 () 127171..128358 + 1188 WP_025999368.1 MFS transporter -
G6Q95_RS23750 () 128436..128693 - 258 WP_000412701.1 bacteriocin immunity protein -
G6Q95_RS23755 () 128694..128927 - 234 WP_000451769.1 HNH endonuclease -
G6Q95_RS23760 () 129023..129294 + 272 Protein_126 hypothetical protein -
G6Q95_RS25520 () 129455..129634 - 180 Protein_127 3'-5' exonuclease -
G6Q95_RS23765 () 129680..129847 - 168 Protein_128 type II toxin-antitoxin system RelE/ParE family toxin -
G6Q95_RS23770 () 129844..130674 + 831 Protein_129 IS66-like element ISEc43 family transposase -
G6Q95_RS25525 () 130718..131366 - 649 Protein_130 DDE-type integrase/transposase/recombinase -
G6Q95_RS23790 () 131423..131854 + 432 Protein_131 relaxase NikB -
G6Q95_RS23795 () 132313..132981 + 669 WP_000155780.1 cysteine hydrolase -
G6Q95_RS23800 () 132987..133847 + 861 WP_001442105.1 DUF2877 domain-containing protein -
G6Q95_RS23805 () 133942..135501 + 1560 WP_000865634.1 acyl-CoA synthetase FdrA -
G6Q95_RS23810 () 135498..136922 + 1425 WP_001093931.1 DUF1116 domain-containing protein -
G6Q95_RS23815 () 136915..137871 + 957 WP_001696801.1 carbamate kinase -
G6Q95_RS23820 () 137888..138277 + 390 WP_001696803.1 hypothetical protein -
G6Q95_RS23825 () 138300..139523 + 1224 WP_024188138.1 cytosine permease -
G6Q95_RS23830 () 139601..140491 + 891 WP_000470711.1 LysR family transcriptional regulator -
G6Q95_RS23835 () 140925..141314 + 390 WP_000595317.1 cytochrome B562 -
G6Q95_RS23840 () 141521..142554 + 1034 Protein_141 IS3 family transposase -
G6Q95_RS25530 () 142549..143025 + 477 Protein_142 ATP-binding cassette domain-containing protein -
G6Q95_RS23845 () 143703..143993 - 291 WP_000633743.1 hypothetical protein -
G6Q95_RS23850 () 144051..144716 - 666 WP_000536047.1 hypothetical protein -
G6Q95_RS23855 () 144819..145097 - 279 Protein_145 serine acetyltransferase -
G6Q95_RS23860 () 145113..145810 - 698 Protein_146 IS1 family transposase -
G6Q95_RS23865 () 146475..146795 + 321 WP_001334006.1 IS3 family transposase -
G6Q95_RS23870 () 147469..148398 - 930 WP_001084376.1 LysR family transcriptional regulator -
G6Q95_RS23875 () 148798..149403 + 606 WP_000066154.1 ankyrin repeat domain-containing protein -
G6Q95_RS23880 () 149489..150337 + 849 WP_000531854.1 DUF2877 domain-containing protein -
G6Q95_RS23885 () 150297..151844 + 1548 WP_000027750.1 acyl-CoA synthetase FdrA -
G6Q95_RS23890 () 151844..153262 + 1419 WP_072645746.1 DUF1116 domain-containing protein -
G6Q95_RS23895 () 153375..154925 + 1551 WP_001084509.1 hypothetical protein -
G6Q95_RS23900 () 154952..155914 + 963 WP_000661609.1 carbamate kinase family protein -
G6Q95_RS23905 () 156466..158043 - 1578 WP_001323889.1 PAS domain-containing methyl-accepting chemotaxis protein -
G6Q95_RS23915 () 158353..158913 + 561 WP_001161490.1 recombinase family protein -
G6Q95_RS23920 () 158917..161883 + 2967 WP_001138014.1 Tn3-like element TnAs1 family transposase -
G6Q95_RS23925 () 162395..163616 - 1222 Protein_158 ISL3 family transposase -
G6Q95_RS23930 () 163716..164080 + 365 Protein_159 IS1 family transposase -
G6Q95_RS23935 () 164135..164917 - 783 WP_001442137.1 IS21-like element IS100kyp family helper ATPase IstB -
G6Q95_RS23940 () 164914..165936 - 1023 WP_000255956.1 IS21-like element IS100 family transposase -
G6Q95_RS23945 () 166025..166372 + 348 Protein_162 IS1-like element IS1A family transposase -
G6Q95_RS23950 () 166812..167099 - 288 WP_000222760.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
G6Q95_RS23955 () 167096..167347 - 252 WP_001132900.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
G6Q95_RS23965 () 168311..169168 - 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
G6Q95_RS23970 () 169161..169643 - 483 WP_001273588.1 hypothetical protein -
G6Q95_RS23975 () 169636..169710 - 75 WP_001442103.1 RepA leader peptide Tap -
G6Q95_RS23980 () 169942..170199 - 258 WP_000083845.1 replication regulatory protein RepA -
G6Q95_RS23985 () 170483..170689 - 207 WP_001351576.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 170676..170737 + 62 NuclAT_1 - Antitoxin Detail
- () 170676..170737 + 62 NuclAT_1 - Antitoxin Detail
- () 170676..170737 + 62 NuclAT_1 - Antitoxin Detail
- () 170676..170737 + 62 NuclAT_1 - Antitoxin Detail
G6Q95_RS25535 () 170993..171067 - 75 Protein_170 endonuclease -
G6Q95_RS23990 () 171313..171525 - 213 WP_001299730.1 ANR family transcriptional regulator -
G6Q95_RS23995 () 171661..172221 - 561 WP_000139315.1 fertility inhibition protein FinO -
G6Q95_RS24000 () 172324..173184 - 861 WP_000704513.1 alpha/beta hydrolase -
G6Q95_RS24005 () 173243..173989 - 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
G6Q95_RS24010 () 174009..179279 - 5271 WP_077891981.1 conjugative transfer relaxase/helicase TraI -
G6Q95_RS24015 () 179361..179588 + 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
G6Q95_RS24020 () 179588..179986 + 399 WP_000911333.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
G6Q95_RS24025 () 179995..182148 - 2154 WP_000009379.1 type IV conjugative transfer system coupling protein TraD -
G6Q95_RS24030 () 182401..183132 - 732 WP_000850416.1 complement resistance protein TraT -
G6Q95_RS24035 () 183146..183655 - 510 WP_000628105.1 conjugal transfer entry exclusion protein TraS -
G6Q95_RS24040 () 183652..186477 - 2826 WP_072652426.1 conjugal transfer mating pair stabilization protein TraG -
G6Q95_RS24045 () 186474..187847 - 1374 WP_000944319.1 conjugal transfer protein TraH -
G6Q95_RS24050 () 188213..188554 - 342 WP_001442101.1 P-type conjugative transfer protein TrbJ -
G6Q95_RS24055 () 188484..189029 - 546 WP_000059833.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
G6Q95_RS24060 () 189016..189300 - 285 WP_000624108.1 type-F conjugative transfer system pilin chaperone TraQ -
G6Q95_RS24065 () 189381..189656 + 276 WP_001513501.1 hypothetical protein -
G6Q95_RS24070 () 189658..190005 - 348 WP_001287907.1 conjugal transfer protein TrbA -
G6Q95_RS24075 () 190021..190764 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
G6Q95_RS24080 () 190757..191014 - 258 WP_000864318.1 conjugal transfer protein TrbE -
G6Q95_RS24085 () 191041..192849 - 1809 WP_072645770.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
G6Q95_RS24090 () 192846..193484 - 639 WP_000777703.1 type-F conjugative transfer system pilin assembly protein TrbC -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance