MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_CP044312 Location: 4295737..4307306 Organism: Escherichia coli strain RM13745 Replicon: chromosome
Accession: NZ_CP044312 Location: 4295737..4307306 Organism: Escherichia coli strain RM13745 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F7D05_RS21125 () | 4292062..4293270 | - | 1209 | WP_021534541.1 | propionate kinase | - |
| F7D05_RS21130 () | 4293296..4294627 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| F7D05_RS21135 () | 4294649..4295638 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| F7D05_RS21140 () | 4295737..4296675 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| F7D05_RS21145 () | 4296864..4297208 | + | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| F7D05_RS21150 () | 4297464..4298003 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| F7D05_RS21155 () | 4298025..4299128 | + | 1104 | WP_148990315.1 | YhaC family protein | - |
| F7D05_RS21165 () | 4300130..4301275 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| F7D05_RS21170 () | 4301372..4302262 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| F7D05_RS21175 () | 4302292..4303062 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| F7D05_RS21180 () | 4303078..4304412 | - | 1335 | WP_000599653.1 | galactarate/glucarate/glycerate transporter GarP | - |
| F7D05_RS21185 () | 4304787..4306358 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| F7D05_RS21190 () | 4306507..4306842 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| F7D05_RS21195 () | 4306842..4307306 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| F7D05_RS21200 () | 4307361..4308170 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| F7D05_RS21205 () | 4308419..4309699 | + | 1281 | WP_000681903.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| F7D05_RS21210 () | 4309722..4310195 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| F7D05_RS21215 () | 4310206..4310985 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| F7D05_RS21220 () | 4310975..4311853 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| F7D05_RS21225 () | 4311871..4312305 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.008 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.008 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.008 |