MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_CP035855 Location: 2923689..2935258 Organism: Escherichia coli TW11681 Replicon: chromosome
Accession: NZ_CP035855 Location: 2923689..2935258 Organism: Escherichia coli TW11681 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXE31_RS14240 (2920014) | 2920014..2921222 | - | 1209 | WP_001295545.1 | propionate kinase | - |
| EXE31_RS14245 (2921248) | 2921248..2922579 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| EXE31_RS14250 (2922601) | 2922601..2923590 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| EXE31_RS14255 (2923689) | 2923689..2924627 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| EXE31_RS14260 (2924984) | 2924984..2925160 | + | 177 | WP_001642220.1 | transcriptional activator TdcR | - |
| EXE31_RS14265 (2925416) | 2925416..2925955 | + | 540 | WP_000675733.1 | protein YhaB | - |
| EXE31_RS14270 (2925977) | 2925977..2927165 | + | 1189 | Protein_2795 | YhaC family protein | - |
| EXE31_RS14280 (2928082) | 2928082..2929227 | - | 1146 | WP_001295546.1 | glycerate 2-kinase | - |
| EXE31_RS14285 (2929324) | 2929324..2930214 | - | 891 | WP_024220121.1 | 2-hydroxy-3-oxopropionate reductase | - |
| EXE31_RS14290 (2930244) | 2930244..2931014 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| EXE31_RS14295 (2931030) | 2931030..2932364 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| EXE31_RS14300 (2932739) | 2932739..2934310 | + | 1572 | WP_001273763.1 | galactarate dehydratase | - |
| EXE31_RS14305 (2934459) | 2934459..2934794 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| EXE31_RS14310 (2934794) | 2934794..2935258 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| EXE31_RS14315 (2935313) | 2935313..2936122 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| EXE31_RS14320 (2936371) | 2936371..2937651 | + | 1281 | WP_000681906.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| EXE31_RS14325 (2937674) | 2937674..2938147 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| EXE31_RS14330 (2938158) | 2938158..2938937 | + | 780 | WP_000406213.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| EXE31_RS14335 (2938927) | 2938927..2939805 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| EXE31_RS14340 (2939823) | 2939823..2940257 | + | 435 | WP_000948827.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.009 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.009 |