MGE detailed information
MGE type: Genomic_island MGE length: 11570 bp
Accession: NZ_CP035826 Location: 1422292..1433861 Organism: Escherichia coli strain 67-1 Replicon: chromosome
Accession: NZ_CP035826 Location: 1422292..1433861 Organism: Escherichia coli strain 67-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EXA05_RS06825 (1418617) | 1418617..1419825 | - | 1209 | WP_001295545.1 | propionate kinase | - |
| EXA05_RS06830 (1419851) | 1419851..1421182 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| EXA05_RS06835 (1421204) | 1421204..1422193 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| EXA05_RS06840 (1422292) | 1422292..1423230 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| EXA05_RS06845 (1423545) | 1423545..1423763 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| EXA05_RS06850 (1424019) | 1424019..1424558 | + | 540 | WP_000675733.1 | protein YhaB | - |
| EXA05_RS06855 (1424580) | 1424580..1425768 | + | 1189 | Protein_1347 | YhaC family protein | - |
| EXA05_RS06865 (1426685) | 1426685..1427830 | - | 1146 | WP_001295546.1 | glycerate 2-kinase | - |
| EXA05_RS06870 (1427927) | 1427927..1428817 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| EXA05_RS06875 (1428847) | 1428847..1429617 | - | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| EXA05_RS06880 (1429633) | 1429633..1430967 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| EXA05_RS06885 (1431342) | 1431342..1432913 | + | 1572 | WP_001273763.1 | galactarate dehydratase | - |
| EXA05_RS06890 (1433062) | 1433062..1433397 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| EXA05_RS06895 (1433397) | 1433397..1433861 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| EXA05_RS06900 (1433916) | 1433916..1434725 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| EXA05_RS06905 (1434974) | 1434974..1436254 | + | 1281 | WP_000681906.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| EXA05_RS06910 (1436277) | 1436277..1436750 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| EXA05_RS06915 (1436761) | 1436761..1437540 | + | 780 | WP_000406213.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| EXA05_RS06920 (1437530) | 1437530..1438408 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| EXA05_RS06925 (1438426) | 1438426..1438860 | + | 435 | WP_000948827.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.009 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.009 |