NZ_CP0190551..184166

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 184166 bp
Accession: NZ_CP019055        Location: 1..184166         Organism: Escherichia coli strain CRE1540       Replicon: plasmid p1540-4


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BVL39_RS27670 () 463..1068 + 606 WP_000066154.1 ankyrin repeat domain-containing protein -
BVL39_RS27675 () 1154..2002 + 849 WP_000531854.1 DUF2877 domain-containing protein -
BVL39_RS27680 () 1962..3509 + 1548 WP_000027750.1 acyl-CoA synthetase FdrA -
BVL39_RS27685 () 3509..4927 + 1419 WP_000084168.1 DUF1116 domain-containing protein -
BVL39_RS27690 () 5040..6590 + 1551 WP_001084509.1 hypothetical protein -
BVL39_RS27695 () 6617..7579 + 963 WP_000661609.1 carbamate kinase family protein -
BVL39_RS27700 () 8415..9636 - 1222 Protein_7 ISL3 family transposase ISEc38 Transposase
BVL39_RS27710 () 9736..10433 + 698 Protein_8 IS1-like element IS1A family transposase -
BVL39_RS27715 () 10449..10727 + 279 Protein_9 serine acetyltransferase -
BVL39_RS27720 () 10830..11495 + 666 WP_000536047.1 hypothetical protein -
BVL39_RS27725 () 11553..11843 + 291 WP_000633743.1 hypothetical protein -
BVL39_RS29330 () 12522..12998 - 477 Protein_12 Multidrug resistance ABC transporter ATP-binding/permease protein BmrA VF
BVL39_RS27730 () 12993..14026 - 1034 Protein_13 Multidrug resistance ABC transporter ATP-binding/permease protein BmrA VF
BVL39_RS27740 () 14233..14622 - 390 WP_000595317.1 cytochrome B562 -
BVL39_RS27745 () 15056..15946 - 891 WP_000470711.1 putative HTH-type transcriptional regulator YahB VF
BVL39_RS27750 () 16024..17247 - 1224 WP_024188138.1 cytosine permease -
BVL39_RS27755 () 17270..17659 - 390 WP_001696803.1 hypothetical protein -
BVL39_RS27760 () 17676..18632 - 957 WP_001696801.1 carbamate kinase -
BVL39_RS27765 () 18625..20049 - 1425 WP_001093931.1 DUF1116 domain-containing protein -
BVL39_RS27770 () 20046..21605 - 1560 WP_000865634.1 acyl-CoA synthetase FdrA -
BVL39_RS27775 () 21700..22560 - 861 WP_001442105.1 DUF2877 domain-containing protein -
BVL39_RS27780 () 22566..23234 - 669 WP_000155780.1 cysteine hydrolase -
BVL39_RS27785 () 23693..24124 - 432 Protein_23 relaxase NikB -
BVL39_RS29335 () 24181..24829 + 649 Protein_24 IS3 family transposase IS1203 Transposase
BVL39_RS27800 () 24873..25703 - 831 Protein_25 IS66 family transposase ISEc43 Transposase
BVL39_RS27805 () 25700..25867 + 168 Protein_26 type II toxin-antitoxin system RelE/ParE family toxin -
BVL39_RS29340 () 25913..26092 + 180 Protein_27 3'-5' exonuclease -
BVL39_RS27815 () 26253..26524 - 272 Protein_28 hypothetical protein -
BVL39_RS27820 () 26620..26853 + 234 WP_000451769.1 HNH endonuclease -
BVL39_RS27825 () 26854..27111 + 258 WP_053216792.1 bacteriocin immunity protein -
BVL39_RS27830 () 27189..28376 - 1188 WP_025999368.1 MFS transporter -
BVL39_RS27835 () 28433..29194 - 762 WP_072647545.1 Fe(3+) dicitrate transport ATP-binding protein FecE VF
BVL39_RS27840 () 29194..30231 - 1038 WP_000110581.1 Hemin transport system permease protein HmuU VF
BVL39_RS27845 () 30231..31229 - 999 WP_000756335.1 ABC transporter substrate-binding protein -
BVL39_RS27850 () 31379..31537 - 159 Protein_35 integrase core domain-containing protein -
BVL39_RS27855 () 31584..32174 - 591 WP_000086538.1 Tn3 family transposase TnpR_ISSba14 Transposase
BVL39_RS27865 () 32752..33762 - 1011 WP_072647544.1 IS110 family transposase IS1663 Transposase
BVL39_RS27870 () 33967..34229 - 263 Protein_38 transposase zinc-binding domain-containing protein -
BVL39_RS27875 () 34229..34594 - 366 WP_000124098.1 hypothetical protein -
BVL39_RS27885 () 34716..35867 - 1152 WP_021514811.1 IS30 family transposase IS30D Transposase
BVL39_RS27890 () 35935..36192 - 258 Protein_41 IS3 family transposase IS911 Transposase
BVL39_RS29085 () 36288..36503 + 216 Protein_42 helix-turn-helix domain-containing protein -
BVL39_RS29090 () 36471..36665 - 195 Protein_43 IS91 family transposase -
BVL39_RS27900 () 36833..40966 + 4134 WP_001696784.1 Hemoglobin-binding protease hbp autotransporter VF
BVL39_RS27905 () 41075..41526 + 452 Protein_45 peptide deformylase -
BVL39_RS29345 () 41513..41779 - 267 Protein_46 resolvase -
BVL39_RS27915 () 41819..43093 - 1275 Protein_47 IS66 family transposase ISEc8 Transposase
BVL39_RS27920 () 43143..43490 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
BVL39_RS27925 () 43487..43867 - 381 WP_001171554.1 IS66 family transposase ISEc8 Transposase
BVL39_RS27930 () 43943..44923 - 981 WP_072647542.1 FAD-dependent oxidoreductase -
BVL39_RS27935 () 44920..45189 - 270 WP_000379710.1 SemiSWEET transporter -
BVL39_RS27940 () 45191..45968 - 778 Protein_52 gfo/Idh/MocA family oxidoreductase -
BVL39_RS29095 () 46129..46365 + 237 WP_001323890.1 colicin V immunity protein -
BVL39_RS27950 () 46343..46654 + 312 WP_001259758.1 colicin V -
BVL39_RS27955 () 46824..48938 - 2115 WP_001183604.1 peptidase domain-containing ABC transporter -
BVL39_RS27960 () 48913..50187 - 1275 WP_171961401.1 HlyD family secretion protein -
BVL39_RS27965 () 50869..51066 + 198 WP_001324224.1 toxin-antitoxin system protein Antitoxin Detail
BVL39_RS27970 () 51063..51245 + 183 WP_000969988.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
BVL39_RS27975 () 51344..51652 + 309 WP_000377483.1 hypothetical protein -
BVL39_RS27985 () 52212..53246 + 1035 WP_072647540.1 3-deoxy-7-phosphoheptulonate synthase -
BVL39_RS28005 () 54091..56268 + 2178 WP_001222186.1 Ferric enterobactin receptor VF
BVL39_RS28010 () 56313..57269 - 957 WP_000271277.1 Ferri-bacillibactin esterase BesA VF
BVL39_RS28015 () 57354..58583 - 1230 WP_000933675.1 Enterochelin esterase VF
BVL39_RS28020 () 58687..62346 - 3660 WP_001442133.1 Multidrug efflux ATP-binding/permease protein VF
BVL39_RS28025 () 62486..63601 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
BVL39_RS28035 () 64837..65936 - 1100 Protein_66 IS481 family transposase ISKpn28 Transposase
BVL39_RS29100 () 66547..66688 + 142 Protein_67 lysis system i-spanin subunit Rz -
BVL39_RS28050 () 66746..67039 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
BVL39_RS28055 () 67746..68974 + 1229 WP_164994192.1 IS3 family transposase IS2 Transposase
BVL39_RS28060 () 69429..70622 + 1194 WP_000450493.1 GTP-binding protein -
BVL39_RS28065 () 70800..70949 + 150 Protein_71 IS3 family transposase IS2 Transposase
BVL39_RS28070 () 71261..72650 + 1390 Protein_72 ISNCY family transposase ISKpn21 Transposase
BVL39_RS28080 () 72885..73826 + 942 WP_000974761.1 hypothetical protein -
BVL39_RS28085 () 73955..74149 - 195 Protein_74 IS200/IS605-like element IS200C family transposase -
BVL39_RS28095 () 74291..74988 + 698 Protein_75 IS1 family transposase -
BVL39_RS28100 () 75400..76770 - 1371 WP_001318212.1 efflux transporter outer membrane subunit -
BVL39_RS28105 () 76774..78714 - 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
BVL39_RS28110 () 78711..79898 - 1188 WP_000928805.1 efflux RND transporter periplasmic adaptor subunit -
BVL39_RS28115 () 80879..81204 + 326 Protein_79 IS3 family transposase ISLad1 Transposase
BVL39_RS28120 () 81436..81594 + 159 WP_001312823.1 integrase core domain-containing protein -
BVL39_RS28135 () 82867..83820 + 954 WP_000280980.1 Protease 7 VF
BVL39_RS28145 () 84253..85362 + 1110 WP_000771475.1 SDR family oxidoreductase -
BVL39_RS28150 () 85431..86333 + 903 WP_001312822.1 hypothetical protein VF
BVL39_RS28155 () 86707..86895 + 189 WP_032148970.1 hypothetical protein -
BVL39_RS28160 () 87016..87756 + 741 WP_001066942.1 tyrosine-type recombinase/integrase -
BVL39_RS28165 () 88041..89018 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
BVL39_RS28175 () 89762..90085 + 324 Protein_87 IS21 family transposase IS21 Transposase
BVL39_RS29350 () 90087..90191 + 105 Protein_88 AAA family ATPase -
BVL39_RS28185 () 90252..90738 + 487 Protein_89 DUF4113 domain-containing protein -
BVL39_RS28190 () 90945..91642 - 698 Protein_90 IS1 family transposase -
BVL39_RS28205 () 91998..92912 + 915 WP_072647572.1 Putative metal ABC transporter substrate-binding protein Hpf VF
BVL39_RS28210 () 92912..93739 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
BVL39_RS28215 () 93736..94593 + 858 WP_072647571.1 Manganese transport system membrane protein MntB ARG
BVL39_RS28220 () 94590..95447 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
BVL39_RS28225 () 95681..95938 - 258 Protein_95 Tn3 family transposase -
BVL39_RS28230 () 95936..96349 + 414 Protein_96 phosphopyruvate hydratase -
BVL39_RS28240 () 96690..97070 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
BVL39_RS28245 () 97450..98643 - 1194 WP_000095526.1 MFS transporter -
BVL39_RS28250 () 98779..100503 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
BVL39_RS28255 () 100504..101451 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
BVL39_RS28260 () 101451..103193 + 1743 WP_001015721.1 Aerobactin synthase VF
BVL39_RS28265 () 103190..104467 + 1278 WP_000750130.1 L-lysine N6-monooxygenase VF
BVL39_RS28270 () 104549..106750 + 2202 WP_000973520.1 Ferric aerobactin receptor VF
BVL39_RS28280 () 107256..107953 + 698 Protein_104 IS1 family transposase -
BVL39_RS28290 () 108207..109229 - 1023 WP_000361402.1 helicase UvrD -
BVL39_RS28295 () 109214..110779 - 1566 WP_001128474.1 AAA family ATPase -
BVL39_RS28300 () 110854..111270 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
BVL39_RS28305 () 111267..111497 - 231 WP_072647566.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
BVL39_RS28310 () 111884..114022 + 2139 WP_001513523.1 AAA family ATPase -
BVL39_RS28315 () 114184..114600 - 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
BVL39_RS28320 () 114597..114827 - 231 WP_001261287.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
BVL39_RS28330 () 115246..115935 + 690 WP_001513524.1 RES family NAD+ phosphorylase -
BVL39_RS28335 () 115966..116655 - 690 WP_001513525.1 helix-turn-helix domain-containing protein -
BVL39_RS28350 () 117211..117429 + 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
BVL39_RS28355 () 117431..117736 + 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
BVL39_RS28360 () 117737..118483 + 747 WP_072748653.1 site-specific integrase -
BVL39_RS28365 () 119183..119332 + 150 Protein_117 RepB family plasmid replication initiator protein -
BVL39_RS28375 () 120738..121184 + 447 WP_000616196.1 hypothetical protein -
BVL39_RS28380 () 121280..121537 - 258 WP_015387373.1 hypothetical protein -
BVL39_RS28385 () 122266..122478 + 213 WP_001523378.1 hypothetical protein -
BVL39_RS28390 () 123605..123781 - 177 WP_001513516.1 lasso peptide microcin J25 -
BVL39_RS28395 () 124121..124747 + 627 WP_001513515.1 lasso peptide biosynthesis B2 protein -
BVL39_RS28400 () 124750..126291 + 1542 WP_001513514.1 lasso peptide isopeptide bond-forming cyclase -
BVL39_RS28405 () 126294..128036 + 1743 WP_001513513.1 ABC transporter ATP-binding protein -
BVL39_RS28410 () 128361..128849 - 489 Protein_126 Tn3 family transposase TnpR_TnEc1 Transposase
BVL39_RS28420 () 128907..129604 + 698 Protein_127 IS1 family transposase -
BVL39_RS28425 () 129904..131070 + 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
BVL39_RS28430 () 131070..132041 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
BVL39_RS29355 () 133111..133449 + 339 WP_001513511.1 hypothetical protein -
BVL39_RS28440 () 133518..134093 + 576 WP_000343071.1 hypothetical protein -
BVL39_RS28450 () 135840..136811 - 972 WP_072647562.1 IS110 family transposase ISEc32 Transposase
BVL39_RS28460 () 137336..137638 + 303 WP_010891293.1 antirestriction protein -
BVL39_RS28465 () 137685..138104 + 420 WP_072647561.1 DUF1380 family protein -
BVL39_RS28470 () 138104..138286 + 183 WP_001027505.1 hypothetical protein -
BVL39_RS29360 () 138274..138602 - 329 Protein_137 pilus assembly protein -
BVL39_RS28490 () 139278..139508 + 231 WP_000218649.1 hypothetical protein -
BVL39_RS28495 () 139560..140921 + 1362 WP_001593055.1 DUF3560 domain-containing protein -
BVL39_RS28500 () 140968..141531 + 564 WP_001333938.1 class I SAM-dependent methyltransferase -
BVL39_RS29365 () 141617..142037 - 421 Protein_141 hypothetical protein -
BVL39_RS28515 () 142009..142980 - 972 WP_072647560.1 IS110 family transposase ISSm3 Transposase
BVL39_RS29370 () 143301..143507 + 207 WP_000547969.1 hypothetical protein -
BVL39_RS28525 () 143533..144072 + 540 WP_072647559.1 single-stranded DNA-binding protein -
BVL39_RS28530 () 144130..144363 + 234 WP_000005985.1 DUF905 family protein -
BVL39_RS28535 () 144422..146386 + 1965 WP_001593049.1 ParB/RepB/Spo0J family partition protein -
BVL39_RS28540 () 146455..146889 + 435 WP_000845962.1 conjugation system SOS inhibitor PsiB -
BVL39_RS28545 () 146886..147089 + 204 Protein_148 plasmid SOS inhibition protein A -
BVL39_RS28550 () 147171..147917 - 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
BVL39_RS28555 () 147932..149473 - 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
BVL39_RS28560 () 149666..150236 + 571 Protein_151 plasmid SOS inhibition protein A -
- () 150205..150429 + 225 NuclAT_0 - -
- () 150205..150429 + 225 NuclAT_0 - -
- () 150205..150429 + 225 NuclAT_0 - -
- () 150205..150429 + 225 NuclAT_0 - -
BVL39_RS28565 () 150473..150631 + 159 WP_001302184.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
BVL39_RS28575 () 151257..151553 + 297 WP_001272245.1 hypothetical protein -
BVL39_RS28580 () 151664..152485 + 822 WP_001234487.1 DUF945 domain-containing protein -
BVL39_RS28585 () 152782..153384 - 603 WP_077250849.1 hypothetical protein VF
BVL39_RS28590 () 153705..154088 + 384 WP_001151524.1 relaxosome protein TraM -
BVL39_RS28595 () 154275..154964 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
BVL39_RS28600 () 155063..155458 + 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
BVL39_RS28605 () 155491..155856 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
BVL39_RS28610 () 155871..156182 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
BVL39_RS28615 () 156204..156770 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
BVL39_RS28620 () 156781..157485 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
BVL39_RS28625 () 157485..158912 + 1428 WP_000146685.1 conjugal transfer protein TraB -
BVL39_RS28630 () 158902..159492 + 591 WP_000002787.1 conjugal transfer protein TraP -
BVL39_RS28635 () 159446..159676 + 231 WP_001352845.1 conjugal transfer protein TrbD -
BVL39_RS28640 () 159688..159939 + 252 WP_001038342.1 conjugal transfer protein TrbG -
BVL39_RS29375 () 159936..160370 + 435 Protein_167 type IV conjugative transfer system lipoprotein TraV -
BVL39_RS28645 () 160371..161639 + 1269 Protein_168 conjugal transfer protein TraG -
BVL39_RS28650 () 161655..162152 + 498 WP_000605857.1 entry exclusion protein -
BVL39_RS28655 () 162184..162915 + 732 WP_023565183.1 complement resistance protein TraT -
BVL39_RS28660 () 163168..165375 + 2208 WP_021526192.1 type IV conjugative transfer system coupling protein TraD -
BVL39_RS28665 () 165384..165782 - 399 WP_000911313.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
BVL39_RS28670 () 165782..166009 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
BVL39_RS28675 () 166091..171361 + 5271 WP_001611029.1 Multifunctional conjugation protein TraI Relaxase
BVL39_RS28680 () 171381..172127 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
BVL39_RS28685 () 172186..173046 + 861 WP_000704513.1 putative protein YcjY VF
BVL39_RS28690 () 173149..173709 + 561 WP_000139315.1 fertility inhibition protein FinO -
BVL39_RS28695 () 173845..174057 + 213 WP_001299730.1 ANR family transcriptional regulator -
BVL39_RS29380 () 174303..174377 + 75 Protein_179 endonuclease -
- () 174633..174694 - 62 NuclAT_1 - Antitoxin Detail
- () 174633..174694 - 62 NuclAT_1 - Antitoxin Detail
- () 174633..174694 - 62 NuclAT_1 - Antitoxin Detail
- () 174633..174694 - 62 NuclAT_1 - Antitoxin Detail
BVL39_RS28705 () 174681..174887 + 207 WP_001351576.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
BVL39_RS28710 () 175171..175428 + 258 WP_000083845.1 replication regulatory protein RepA -
BVL39_RS28720 () 175660..175734 + 75 WP_001442103.1 RepA leader peptide Tap -
BVL39_RS28725 () 175727..176209 + 483 WP_001273588.1 hypothetical protein -
BVL39_RS28730 () 176202..177059 + 858 WP_000774297.1 incFII family plasmid replication initiator RepA -
BVL39_RS28735 () 178022..178273 + 252 WP_001132900.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
BVL39_RS28740 () 178270..178557 + 288 WP_000222760.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
BVL39_RS28750 () 178997..179344 - 348 Protein_187 IS1-like element IS1A family transposase -
BVL39_RS28760 () 179433..180455 + 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
BVL39_RS28765 () 180452..181234 + 783 WP_001442137.1 IS21 family transposase IS100kyp Transposase
BVL39_RS28770 () 181289..181653 - 365 Protein_190 IS1 family transposase -
BVL39_RS29115 () 182318..182638 + 321 WP_001334006.1 IS3 family transposase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance