MGE detailed information
MGE type: Genomic_island MGE length: 11450 bp
Accession: NZ_CP010315 Location: 3579173..3590622 Organism: Escherichia coli strain 789 Replicon: chromosome
Accession: NZ_CP010315 Location: 3579173..3590622 Organism: Escherichia coli strain 789 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AC789_RS17620 () | 3575498..3576706 | - | 1209 | WP_044502336.1 | propionate kinase | - |
| AC789_RS17625 () | 3576732..3578063 | - | 1332 | WP_044502337.1 | threonine/serine transporter TdcC | - |
| AC789_RS17630 () | 3578085..3579074 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| AC789_RS17635 () | 3579173..3580111 | - | 939 | WP_044502338.1 | transcriptional regulator TdcA | - |
| AC789_RS30135 () | 3580426..3580644 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| AC789_RS17645 () | 3580900..3581439 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| AC789_RS17650 () | 3581461..3582564 | + | 1104 | WP_149036382.1 | YhaC family protein | - |
| AC789_RS17655 () | 3583446..3584591 | - | 1146 | WP_001297158.1 | glycerate 2-kinase | - |
| AC789_RS17660 () | 3584688..3585578 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AC789_RS17665 () | 3585608..3586378 | - | 771 | WP_001058214.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| AC789_RS17670 () | 3586394..3587728 | - | 1335 | WP_000599653.1 | galactarate/glucarate/glycerate transporter GarP | - |
| AC789_RS17675 () | 3588103..3589674 | + | 1572 | WP_001273761.1 | galactarate dehydratase | - |
| AC789_RS17680 () | 3589823..3590158 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| AC789_RS17685 () | 3590158..3590622 | + | 465 | WP_000347251.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| AC789_RS17690 () | 3590677..3591486 | - | 810 | WP_000072192.1 | aga operon transcriptional regulator AgaR | - |
| AC789_RS17695 () | 3591735..3593015 | + | 1281 | WP_044502339.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| AC789_RS17700 () | 3593038..3593511 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| AC789_RS17705 () | 3593522..3594301 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| AC789_RS17710 () | 3594291..3595169 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| AC789_RS17715 () | 3595187..3595621 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.009 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.009 | |
| Escherichia coli HS | Genomic island | TA22436 | NC_009800 | 3314965..3326421 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.009 | |
| Escherichia coli C | Genomic island | TA75057 | NZ_CP020543 | 640607..652281 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.009 |