SecReT4
T4SS ID225
StrainBartonella tribocorum CIP 105476
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010161
Location1800215..1812931
NameVirB
Functioneffector translocation
ClassificationType IVA; Type P
experimental Experimental investigation has been performed on this T4SS.
structure Information of structure: structureVirB8

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number011111111
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_010161
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Btr_1685 (ribF)1795506..1796489 [-], 984163868770bifunctional riboflavin kinase/FMN adenylyltransferase 
2Btr_16861796522..1797367 [-], 846163868771HAD family sugar phosphatase 
3Btr_1687 (dicA)1798604..1798963 [+], 360163868772transcriptional regulator 
4Btr_16881799101..1799772 [-], 672163868773hypothetical protein 
5Btr_1689 (virB2)1800215..1800535 [+], 321163868774VirB2 protein  VirB2
6Btr_1690 (virB3)1800536..1800844 [+], 309163868775VirB3 protein  VirB3
7Btr_1691 (virB4)1800867..1803221 [+], 2355163868776VirB4 protein  VirB4
8Btr_1692 (virB5)1803218..1803703 [+], 486163868777VirB5 protein  VirB5
9Btr_1693 (virB6)1803690..1804667 [+], 978163868778VirB6 protein  VirB6
10Btr_1694 (virB7)1804879..1805193 [+], 315163868779VirB7 protein  VirB7
11Btr_1695 (virB8)1805183..1805851 [+], 669163868780VirB8 protein  VirB8
12Btr_1696 (virB9)1805848..1806714 [+], 867163868781VirB9 protein precursor  VirB9
13Btr_1697 (virB10)1806707..1807879 [+], 1173163868782VirB10 protein  VirB10
14Btr_1698 (virB11)1807876..1808946 [+], 1071163868783VirB11 protein  VirB11
15Btr_16991809009..1809224 [+], 216163868784hypothetical protein 
16Btr_1700 (bepA)1809235..1810869 [+], 1635163868785hypothetical protein 
17Btr_1701 (virD4)1811015..1812931 [+], 1917163868786conjugal transfer coupling protein TraG  VirD4
18Btr_1704 (bepC)1814544..1816142 [+], 1599163868787hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes

Effectors
BepA, BepC, BepD, BepH, BepE, BepF, BepI

The information of protein effectors
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  *
1Btr_1700 (bepA)1809235..1810869 [+], 1635163868785hypothetical protein  BepA
2Btr_1704 (bepC)1814544..1816142 [+], 1599163868787hypothetical protein  BepC
3Btr_1705 (bepD)1816452..1818026 [+], 1575163868788hypothetical protein  BepD
4Btr_1706 (bepH)1818370..1819188 [+], 819163868789BepH protein  BepH
5Btr_1707 (bepE)1819541..1820833 [+], 1293163868790hypothetical protein  BepE
6Btr_1709 (bepF)1821138..1823105 [+], 1968163868791hypothetical protein  BepF
7Btr_1710 (bepI)1823441..1825813 [+], 2373163868792BepI protein  BepI


Download FASTA format files
Proteins        Genes
The information on structure of this T4ss

#NameImageResourceDetailReference
1VirB84MEI PDB (4MEI)Crystal structure of a VirB8 Type IV secretion system machinery soluble domain from Bartonella tribocorum.(1) PubMed: 26646013
(1) Gillespie JJ et al. (2015). Structural Insight into How Bacteria Prevent Interference between Multiple Divergent Type IV Secretion Systems. MBio. 6(6):e01867-15. [PudMed:26646013] experimental
(1) Schulein R; Dehio C (2002). The VirB/VirD4 type IV secretion system of Bartonella is essential for establishing intraerythrocytic infection. Mol Microbiol. 46(4):1053-67. [PudMed:12421311]
 

Genomics & Bioinformatics Group in MML, SJTU