Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEC/celB   Type   Machinery gene
Locus tag   ELZ51_RS07270 Genome accession   NZ_LR134094
Coordinates   1430894..1433137 (-) Length   747 a.a.
NCBI ID   WP_126426870.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1425894..1438137
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS07245 (NCTC4669_01543) - 1426504..1427724 (+) 1221 WP_115252980.1 DUF3114 domain-containing protein -
  ELZ51_RS07250 (NCTC4669_01544) - 1427844..1428904 (-) 1061 Protein_1394 serine hydrolase -
  ELZ51_RS07260 (NCTC4669_01546) sodA 1429071..1429676 (-) 606 WP_126426866.1 superoxide dismutase SodA -
  ELZ51_RS07265 (NCTC4669_01547) holA 1429766..1430812 (-) 1047 WP_126426868.1 DNA polymerase III subunit delta -
  ELZ51_RS07270 (NCTC4669_01548) comEC/celB 1430894..1433137 (-) 2244 WP_126426870.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ELZ51_RS07275 (NCTC4669_01549) comEA/celA/cilE 1433118..1433780 (-) 663 WP_003051564.1 helix-hairpin-helix domain-containing protein Machinery gene
  ELZ51_RS07280 (NCTC4669_01550) - 1434176..1434916 (-) 741 WP_164549225.1 lysophospholipid acyltransferase family protein -
  ELZ51_RS07285 (NCTC4669_01551) - 1435034..1435810 (+) 777 WP_126426874.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  ELZ51_RS07290 (NCTC4669_01552) - 1435800..1436078 (+) 279 WP_115246202.1 GIY-YIG nuclease family protein -
  ELZ51_RS07295 (NCTC4669_01553) - 1436102..1438102 (-) 2001 WP_126426876.1 potassium transporter Kup -

Sequence


Protein


Download         Length: 747 a.a.        Molecular weight: 85135.63 Da        Isoelectric Point: 9.5016

>NTDB_id=997752 ELZ51_RS07270 WP_126426870.1 1430894..1433137(-) (comEC/celB) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MNYRWIKWSPLPPIQLAFLVMALYYQIYCPSWLTCLLSSCLGMLLLKQFPQQTLCKVVMILALFAAVFVYRKHQLRQQLE
TQPLQVSQVALVPDSIRINGDQLAVIGRHGNHSYQLFYRFKHQTEARFFQKEYRWIVMHAKIVLDKAETSRNFRGFNYQS
FLAYQGIYRIGKVEQVEQLEVVSPKSVGDYLSSLRRQAIVHCHQSFPKPMSHYLTGLLFGYLDKSFGEMTDYYSQLGIIH
LFALSGMQVGFFLTCFRRGLTLLAIPLEWIKWIELPFACLYAALTGYSISVIRSLLQAQLGNLGIKGLNNLAYAFLLVLL
WNAHALMTVGGVLTFSYAFILTVITFEELSGVKKHFVQVVTVSLGMLPFLLFYFASFNPMSMVLTGLLSYLFDVLILPLL
CLVFCLSPLITLSGCNYLFLFLEKVIQFLGNTLNVSLVFGSPTSWHLLILVISFAILYDHRQIRQRVITCGLLIGLTLLS
VKYPLTNEVTFIDIGQGDSILVRDWTGKNLLIDVGGRLSFSSKEQWRQGHQTSNAQKTLIPYLKSRGIHTIDQLLVTHAD
TDHMGDIEAVAKAIRIKEILTSQGSLSQPSFVRRLRRLKCHVRVLAAGDQLPIMGSVLQVLYPWQLGDGKNNDSLVLYGR
LLNQTFLFTGDLEKEGENEIIERYPQLRVDYLKAGHHGSNTSSSAAFLDHIQPKVAFISAGKNNRYQHPHRETLTRLEDR
GISYYRTDIQGAIRLTGWLNWHIETAR

Nucleotide


Download         Length: 2244 bp        

>NTDB_id=997752 ELZ51_RS07270 WP_126426870.1 1430894..1433137(-) (comEC/celB) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAACTATCGTTGGATTAAGTGGTCTCCCTTGCCTCCCATTCAACTAGCCTTTTTGGTAATGGCTCTTTATTATCAGAT
TTATTGTCCTAGCTGGTTGACTTGCTTACTTAGCAGCTGTTTAGGAATGTTACTATTGAAGCAGTTTCCTCAACAGACCC
TCTGTAAGGTTGTTATGATTCTGGCCTTATTTGCTGCTGTCTTTGTTTATCGGAAACATCAGTTGAGACAGCAATTGGAA
ACACAACCTTTACAAGTGTCTCAGGTAGCATTGGTTCCGGATAGTATTCGAATTAATGGAGATCAATTAGCTGTTATTGG
GCGTCACGGTAATCATTCTTATCAGTTGTTTTATCGTTTTAAACATCAAACGGAAGCCCGATTTTTCCAAAAAGAGTACC
GTTGGATAGTGATGCATGCCAAAATAGTATTGGACAAGGCTGAGACTTCCCGAAATTTTAGAGGATTTAATTACCAATCT
TTTTTAGCCTATCAGGGAATTTACAGGATAGGAAAAGTGGAACAAGTAGAGCAGCTTGAAGTGGTTTCACCAAAGTCAGT
AGGTGATTATTTATCTTCTTTGAGGCGACAGGCTATTGTCCATTGTCACCAATCCTTTCCAAAGCCCATGTCTCATTATT
TGACGGGACTCCTTTTTGGCTATTTGGATAAGTCCTTTGGTGAGATGACAGATTATTATAGTCAGCTTGGTATCATTCAT
CTTTTTGCCCTATCAGGGATGCAGGTTGGTTTCTTTTTAACCTGTTTTAGAAGAGGTTTGACGCTATTAGCTATTCCTCT
CGAATGGATTAAATGGATAGAACTTCCCTTTGCCTGTCTATATGCTGCGCTGACAGGTTACAGTATTTCTGTTATTCGAA
GCCTTCTGCAGGCCCAATTAGGTAATCTAGGCATAAAAGGTTTAAATAACCTGGCTTACGCTTTCTTACTTGTTCTTTTA
TGGAATGCTCATGCTTTGATGACTGTTGGTGGAGTACTAACATTTAGCTATGCGTTTATCTTAACTGTTATCACTTTTGA
GGAGTTATCGGGAGTTAAAAAGCATTTCGTTCAGGTCGTCACCGTTTCTTTAGGGATGTTACCTTTCTTGCTCTTTTATT
TTGCTAGTTTTAACCCCATGTCAATGGTGTTAACAGGGCTTTTGTCTTATCTCTTCGATGTTTTGATTTTGCCTCTTCTT
TGCTTGGTTTTCTGTTTGTCTCCTTTGATAACTCTCTCAGGATGTAATTATCTCTTTCTTTTCTTAGAAAAAGTCATTCA
ATTTCTTGGGAATACCCTCAATGTCTCCCTTGTTTTTGGAAGTCCGACCAGTTGGCACTTGCTTATCTTGGTGATTAGCT
TCGCTATTCTTTATGACCATCGGCAGATACGACAAAGAGTTATCACTTGCGGCTTGCTCATAGGCCTGACGCTTTTATCT
GTTAAATATCCTTTGACCAATGAAGTGACCTTTATCGACATTGGCCAGGGCGATAGTATTTTAGTGAGGGATTGGACAGG
AAAAAATCTCTTAATAGATGTAGGTGGGCGCCTTTCCTTTTCTTCAAAAGAGCAGTGGCGACAGGGGCACCAGACATCGA
ATGCTCAGAAAACCTTAATTCCTTACTTAAAAAGTAGAGGCATTCACACCATTGACCAATTACTAGTGACTCATGCGGAT
ACTGATCATATGGGGGATATAGAGGCGGTTGCCAAAGCTATTCGGATAAAGGAGATTTTGACTAGCCAAGGTAGTTTAAG
CCAGCCAAGCTTTGTTAGGCGGTTAAGGCGTTTAAAATGTCATGTTAGGGTTTTAGCAGCTGGAGACCAATTGCCTATTA
TGGGAAGTGTCTTACAGGTACTCTATCCTTGGCAGTTAGGGGACGGGAAAAATAATGATTCTCTGGTTCTTTATGGTAGG
CTCCTCAATCAAACTTTTCTATTTACAGGTGATTTGGAAAAAGAGGGGGAAAACGAGATCATAGAACGTTATCCTCAACT
AAGAGTAGATTATTTAAAAGCAGGTCACCATGGATCAAATACCTCTTCTAGTGCAGCTTTTTTAGACCATATTCAGCCTA
AAGTGGCCTTTATTTCTGCTGGAAAAAATAACCGTTATCAGCATCCTCACAGAGAAACCCTAACCCGTTTGGAGGATAGG
GGAATTTCTTATTATCGCACGGATATTCAAGGAGCTATTCGGTTGACAGGGTGGCTAAACTGGCATATTGAGACTGCTCG
TTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEC/celB Streptococcus mitis NCTC 12261

45.906

99.732

0.458

  comEC/celB Streptococcus mitis SK321

45.638

99.732

0.455

  comEC/celB Streptococcus pneumoniae Rx1

44.92

100

0.45

  comEC/celB Streptococcus pneumoniae D39

44.92

100

0.45

  comEC/celB Streptococcus pneumoniae R6

44.92

100

0.45

  comEC/celB Streptococcus pneumoniae TIGR4

44.98

100

0.45

  comEC Lactococcus lactis subsp. cremoris KW2

41.145

100

0.414