Detailed information NTG0995235

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: AAYR27_RS06765
• Genome accession: NZ_CP154912
• Coordinates: 1351849..1352505 (+)
• Length: 218 a.a.
• NCBI ID: WP_260983460.1
• Uniprot ID: -
• Organism: Bacillus safensis strain FUA2118
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1346849..1357505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR27_RS06740 (AAYR27_06740)	degS	1346975..1348150 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AAYR27_RS06745 (AAYR27_06745)	degU	1348215..1348904 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AAYR27_RS06750 (AAYR27_06750)	-	1349120..1349962 (+)	843	WP_024423625.1	DegV family protein	-
AAYR27_RS06755 (AAYR27_06755)	comFA	1350080..1351480 (+)	1401	WP_309300290.1	DEAD/DEAH box helicase	Machinery gene
AAYR27_RS06760 (AAYR27_06760)	-	1351529..1351822 (+)	294	WP_024423623.1	competence protein ComFB	-
AAYR27_RS06765 (AAYR27_06765)	comFC	1351849..1352505 (+)	657	WP_260983460.1	ComF family protein	Machinery gene
AAYR27_RS06770 (AAYR27_06770)	-	1352562..1352981 (+)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
AAYR27_RS06775 (AAYR27_06775)	flgM	1353061..1353324 (+)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
AAYR27_RS06780 (AAYR27_06780)	-	1353343..1353825 (+)	483	WP_024423619.1	flagellar protein FlgN	-
AAYR27_RS06785 (AAYR27_06785)	flgK	1353841..1355361 (+)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
AAYR27_RS06790 (AAYR27_06790)	flgL	1355371..1356279 (+)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
AAYR27_RS06795 (AAYR27_06795)	-	1356326..1356904 (+)	579	WP_024426253.1	DUF6470 family protein	-
AAYR27_RS06800 (AAYR27_06800)	fliW	1356933..1357367 (+)	435	WP_024423615.1	flagellar assembly protein FliW	-

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24841.89 Da
• Isoelectric Point: 9.9148

>NTDB_id=995235 AAYR27_RS06765 WP_260983460.1 1351849..1352505(+) (comFC) [Bacillus safensis strain FUA2118]
MPAFTWKSFLLLNDDRLCVACKNHLVKIDRPICPTCGRAQSNDQLCQDCNSWNERSDSTKVLVKNRSVYTYNDLMKDVLA
RFKFRGDTALAELFKKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=995235 AAYR27_RS06765 WP_260983460.1 1351849..1352505(+) (comFC) [Bacillus safensis strain FUA2118]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGATCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAATGATTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.463	99.083	0.5
comFC/cflB	Streptococcus pneumoniae TIGR4	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae Rx1	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae D39	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae R6	37.209	98.624	0.367