Detailed information NTG0995232

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AAYR27_RS06740
• Genome accession: NZ_CP154912
• Coordinates: 1346975..1348150 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain FUA2118
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1341975..1353150

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR27_RS06720 (AAYR27_06720)	-	1342576..1343772 (+)	1197	WP_034281445.1	glycosyltransferase	-
AAYR27_RS06725 (AAYR27_06725)	-	1343907..1344974 (+)	1068	WP_024423627.1	MraY family glycosyltransferase	-
AAYR27_RS06730 (AAYR27_06730)	-	1345010..1346101 (-)	1092	WP_034281103.1	LCP family protein	-
AAYR27_RS06735 (AAYR27_06735)	-	1346086..1346754 (-)	669	WP_012011434.1	YigZ family protein	-
AAYR27_RS06740 (AAYR27_06740)	degS	1346975..1348150 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
AAYR27_RS06745 (AAYR27_06745)	degU	1348215..1348904 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
AAYR27_RS06750 (AAYR27_06750)	-	1349120..1349962 (+)	843	WP_024423625.1	DegV family protein	-
AAYR27_RS06755 (AAYR27_06755)	comFA	1350080..1351480 (+)	1401	WP_309300290.1	DEAD/DEAH box helicase	Machinery gene
AAYR27_RS06760 (AAYR27_06760)	-	1351529..1351822 (+)	294	WP_024423623.1	competence protein ComFB	-
AAYR27_RS06765 (AAYR27_06765)	comFC	1351849..1352505 (+)	657	WP_260983460.1	ComF family protein	Machinery gene
AAYR27_RS06770 (AAYR27_06770)	-	1352562..1352981 (+)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=995232 AAYR27_RS06740 WP_003213166.1 1346975..1348150(+) (degS) [Bacillus safensis strain FUA2118]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=995232 AAYR27_RS06740 WP_003213166.1 1346975..1348150(+) (degS) [Bacillus safensis strain FUA2118]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGGTTATTAAGTTTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCGCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTAAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCTTTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841