Detailed information NTG0994131

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AAIA72_RS08170
• Genome accession: NZ_CP154858
• Coordinates: 1669147..1670211 (-)
• Length: 354 a.a.
• NCBI ID: WP_369602907.1
• Uniprot ID: -
• Organism: Hahella sp. SMD15-11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1664147..1675211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAIA72_RS08145 (AAIA72_08135)	aroK	1664600..1665130 (-)	531	WP_369602902.1	shikimate kinase AroK	-
AAIA72_RS08150 (AAIA72_08140)	pilQ	1665235..1667232 (-)	1998	WP_369602903.1	type IV pilus secretin PilQ	Machinery gene
AAIA72_RS08155 (AAIA72_08145)	-	1667376..1667915 (-)	540	WP_369602904.1	pilus assembly protein PilP	-
AAIA72_RS08160 (AAIA72_08150)	-	1667912..1668556 (-)	645	WP_369602905.1	type 4a pilus biogenesis protein PilO	-
AAIA72_RS08165 (AAIA72_08155)	-	1668569..1669147 (-)	579	WP_369602906.1	PilN domain-containing protein	-
AAIA72_RS08170 (AAIA72_08160)	pilM	1669147..1670211 (-)	1065	WP_369602907.1	pilus assembly protein PilM	Machinery gene
AAIA72_RS08175 (AAIA72_08165)	-	1670383..1671605 (+)	1223	Protein_1585	penicillin-binding protein 1A	-
AAIA72_RS08180 (AAIA72_08170)	-	1671615..1672775 (+)	1161	WP_369602983.1	penicillin-binding protein 1A	-
AAIA72_RS08185 (AAIA72_08175)	-	1672870..1674144 (-)	1275	WP_369602908.1	malic enzyme-like NAD(P)-binding protein	-
AAIA72_RS08190 (AAIA72_08180)	rpmE	1674340..1674555 (-)	216	WP_369602909.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38333.77 Da
• Isoelectric Point: 4.2939

>NTDB_id=994131 AAIA72_RS08170 WP_369602907.1 1669147..1670211(-) (pilM) [Hahella sp. SMD15-11]
MFGLFGKKKQALLGIDISSTAVKLIELGQQGGRYRVESYAVEPLPPNAVVEKNITDVEAVGEAVKRCVAKAKTSTRLAAV
AVAGSAVITKTIQMQAGLKDSEMENQIQLEADQYIPYPLDEVAIDFDVIGPNPNNPDQVDVLLAACRRENVEMREDALEI
AGLQAKVVDVEAFAMERAYSLIEPSLERTGEELTVAIVDIGATMTTLSVLADGVTVYTREQLFGGRQLTEEIQRRYGLSL
EEAGMAKKQGGLPDDYEPEVLEPFKDAVVQQVHRSMNFFFSSTPYNEVDYIILAGGTASIAGLPEKVQEHMGIPTLVANP
FADMALSSRVNASLLANDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=994131 AAIA72_RS08170 WP_369602907.1 1669147..1670211(-) (pilM) [Hahella sp. SMD15-11]
GTGTTCGGACTATTCGGCAAAAAGAAGCAGGCCCTGTTGGGGATTGATATCAGCTCCACAGCGGTCAAGCTCATTGAGCT
TGGGCAGCAGGGCGGCCGTTACCGCGTAGAGAGCTACGCAGTGGAGCCTCTGCCTCCCAACGCAGTGGTCGAGAAAAACA
TTACTGACGTCGAGGCCGTCGGAGAGGCCGTCAAGCGTTGTGTTGCCAAGGCCAAGACCAGCACCCGTCTGGCTGCTGTC
GCCGTTGCGGGCTCGGCTGTCATCACCAAGACCATCCAGATGCAGGCAGGCCTCAAGGACTCCGAGATGGAGAACCAGAT
CCAGCTTGAGGCCGATCAGTACATTCCTTATCCCCTGGACGAAGTGGCCATCGACTTTGACGTGATCGGACCCAACCCGA
ACAATCCGGATCAGGTGGATGTCCTGCTGGCTGCGTGTCGTCGTGAAAATGTCGAGATGCGCGAAGATGCCCTGGAAATC
GCGGGGTTGCAGGCGAAGGTGGTTGACGTGGAGGCTTTTGCGATGGAGCGGGCCTACAGTCTGATCGAGCCTTCGCTGGA
GCGTACCGGTGAGGAACTGACGGTTGCCATCGTGGATATCGGTGCGACCATGACCACACTCAGCGTTCTGGCAGACGGCG
TGACGGTCTATACCCGCGAGCAGCTGTTTGGCGGGCGTCAGCTGACAGAAGAGATCCAGCGCCGCTATGGCTTGTCACTG
GAGGAAGCCGGCATGGCCAAGAAACAGGGCGGTTTGCCGGATGACTACGAGCCCGAAGTGCTCGAGCCGTTCAAGGATGC
GGTTGTACAGCAAGTCCATCGCTCAATGAACTTCTTCTTTTCTTCAACACCTTATAACGAGGTGGATTACATCATTCTTG
CCGGTGGTACGGCATCCATTGCCGGCCTGCCGGAAAAGGTACAGGAACACATGGGCATTCCCACGCTGGTGGCCAATCCG
TTTGCCGACATGGCACTCTCTTCCAGGGTCAATGCATCGCTTCTGGCCAATGATGCGCCATCGTTGATGATTGCCTGTGG
ACTGGCCATGAGGAGTTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.65	100	0.557
comM	Acinetobacter nosocomialis M2	55.65	100	0.557
comM	Acinetobacter baylyi ADP1	52.26	100	0.523
pilM	Legionella pneumophila strain ERS1305867	44.915	100	0.449