Detailed information NTG0099402

Bioinformatically predicted

Overview

• Name: cqsA
• Type: Regulator
• Locus tag: QMG88_RS24130
• Genome accession: NZ_AP027053
• Coordinates: 1216937..1218109 (+)
• Length: 390 a.a.
• NCBI ID: WP_004408985.1
• Uniprot ID: A0AAV2VT62
• Organism: Vibrio nigripulchritudo strain TUMSAT-V.nig3
• Function: induction of competence (predicted from homology) Competence regulation

Genomic Context

Location: 1211937..1223109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMG88_RS24110 (TUMSATVNIG3_47140)	ylqF	1212154..1213089 (+)	936	WP_022591890.1	ribosome biogenesis GTPase YlqF	-
QMG88_RS24115 (TUMSATVNIG3_47150)	-	1213489..1214280 (+)	792	WP_004408980.1	EAL domain-containing protein	-
QMG88_RS24120 (TUMSATVNIG3_47160)	-	1214307..1215299 (-)	993	WP_281830551.1	GTP-binding protein	-
QMG88_RS24125 (TUMSATVNIG3_47170)	-	1215752..1216714 (+)	963	WP_281830552.1	TDT family transporter	-
QMG88_RS24130 (TUMSATVNIG3_47180)	cqsA	1216937..1218109 (+)	1173	WP_004408985.1	alpha-hydroxyketone-type quorum-sensing autoinducer synthase	Regulator
QMG88_RS24135 (TUMSATVNIG3_47190)	-	1218283..1220016 (-)	1734	WP_281830553.1	hybrid sensor histidine kinase/response regulator	-
QMG88_RS24140 (TUMSATVNIG3_47200)	-	1220051..1220335 (-)	285	WP_281830554.1	hypothetical protein	-
QMG88_RS24145 (TUMSATVNIG3_47210)	-	1220828..1221598 (-)	771	WP_281830555.1	helix-turn-helix transcriptional regulator	-
QMG88_RS24150 (TUMSATVNIG3_47220)	-	1221732..1222979 (+)	1248	WP_281830556.1	MFS transporter	-

Sequence

Protein

• Length: 390 a.a.
• Molecular weight: 43206.11 Da
• Isoelectric Point: 6.1542

>NTDB_id=99402 QMG88_RS24130 WP_004408985.1 1216937..1218109(+) (cqsA) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
MSNLTAKPLPNFIENKLENYLEKNIYSRNNGKHIVQGLLPNDDSIVLRSNDYLAICNHDYIKERQISALTHAKREPIMSA
VFQDQTIEEGSFEQKFADFLGFDHCIITQSGWAANVGLLQTIADENTHIYIDFFAHMSLWHGAQNANSKIHPFLHNRPKN
LLKQIKKYGPGIVVIDSVYSTHGTVAPLKEFVEVANEQGCAIIVDESHSIGTHGPHGAGLLAELGLTDKVDFVTTSLAKT
FSYRAGAILCHHKVHECLPFISLPAIFSSGIIPYEMEALKATLELIKGSDERREDLFNKSHRLIAGLKSLDISTDSDSQI
VAIETGTEENTEKVRDFFELNGIFGAVFCSPATPKNKSVIRLSVNSDVSDSELDKVLTVCSLAKEKGLLQ

Nucleotide

• Length: 1173 bp

>NTDB_id=99402 QMG88_RS24130 WP_004408985.1 1216937..1218109(+) (cqsA) [Vibrio nigripulchritudo strain TUMSAT-V.nig3]
ATGAGTAACTTAACAGCTAAACCGCTGCCGAATTTTATTGAGAATAAACTTGAGAACTACCTCGAGAAGAACATTTACTC
ACGAAATAACGGCAAACACATCGTCCAGGGCTTGCTGCCAAACGATGATTCGATAGTACTTCGTAGTAACGACTACTTGG
CAATCTGTAATCACGATTACATTAAGGAGAGACAAATCAGTGCGCTTACCCATGCTAAGCGCGAGCCGATCATGTCGGCG
GTATTTCAGGACCAAACCATCGAAGAAGGTTCTTTCGAGCAGAAATTTGCTGATTTTCTAGGCTTTGACCACTGTATTAT
CACTCAGTCAGGCTGGGCGGCAAACGTAGGGCTTCTTCAGACCATCGCCGATGAAAACACCCATATTTACATCGACTTTT
TCGCTCATATGTCCTTGTGGCATGGTGCACAAAACGCGAACAGTAAGATCCACCCCTTCCTACACAATCGTCCTAAGAAC
TTACTGAAGCAGATAAAGAAATACGGACCCGGTATTGTGGTTATCGACTCGGTATACAGTACTCACGGAACGGTCGCACC
ATTGAAAGAGTTTGTCGAAGTCGCAAATGAACAAGGCTGCGCGATCATTGTCGACGAATCTCATTCGATTGGTACACACG
GACCACACGGAGCCGGTTTGCTGGCTGAGTTAGGGTTAACGGATAAAGTTGATTTTGTTACCACCAGCCTGGCAAAAACG
TTTTCTTACCGAGCTGGCGCTATTTTGTGCCATCACAAAGTGCACGAATGTCTGCCCTTTATATCACTTCCTGCCATCTT
CAGTTCGGGCATCATTCCTTACGAAATGGAGGCACTCAAAGCAACGCTGGAATTGATTAAGGGAAGCGACGAAAGACGCG
AGGATTTATTCAATAAATCTCATAGACTGATTGCCGGTTTGAAGTCTTTAGATATCAGTACAGACAGCGACTCTCAGATT
GTTGCTATAGAAACGGGAACAGAGGAAAACACAGAAAAGGTCAGAGACTTTTTCGAACTTAATGGCATTTTCGGTGCGGT
TTTTTGTAGCCCGGCAACGCCAAAAAATAAGAGTGTTATTCGCCTGTCTGTAAATAGCGATGTCAGTGATTCTGAGTTAG
ACAAAGTGCTTACTGTGTGTAGCTTGGCGAAAGAAAAAGGACTCTTACAATAG

Domains

Predicted by InterproScan.

• Aminotransferase class I and II (Aminotran_1_2) (45-377)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cqsA	Vibrio cholerae strain A1552	54.974	97.949	0.538