Detailed information NTG0099121

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SP4011_RS07000
• Genome accession: NZ_AP026968
• Coordinates: 1347200..1348153 (-)
• Length: 317 a.a.
• NCBI ID: WP_338618480.1
• Uniprot ID: -
• Organism: Streptococcus parapneumoniae strain SP4011
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1342200..1353153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SP4011_RS06975 (SP4011_13370)	-	1342276..1342896 (+)	621	WP_338618472.1	histidine phosphatase family protein	-
SP4011_RS06980	-	1343254..1343349 (-)	96	Protein_1330	IS630 family transposase	-
SP4011_RS06985 (SP4011_13380)	prsA	1343656..1344597 (-)	942	WP_338618474.1	peptidylprolyl isomerase PrsA	-
SP4011_RS06990 (SP4011_13390)	-	1344664..1345377 (-)	714	WP_338618476.1	O-methyltransferase	-
SP4011_RS06995 (SP4011_13400)	pepF	1345379..1347181 (-)	1803	WP_338618478.1	oligoendopeptidase F	Regulator
SP4011_RS07000 (SP4011_13410)	coiA	1347200..1348153 (-)	954	WP_338618480.1	competence protein CoiA	Machinery gene
SP4011_RS07005 (SP4011_13420)	tehB	1348226..1349086 (-)	861	WP_338618481.1	SAM-dependent methyltransferase TehB	-
SP4011_RS07010 (SP4011_13430)	smpB	1349102..1349569 (-)	468	WP_001051750.1	SsrA-binding protein SmpB	-
SP4011_RS07015 (SP4011_13440)	rnr	1349532..1351886 (-)	2355	WP_338618486.1	ribonuclease R	-
SP4011_RS07020 (SP4011_13450)	secG	1351987..1352220 (-)	234	WP_000282517.1	preprotein translocase subunit SecG	-
SP4011_RS07025	rpmG	1352260..1352409 (-)	150	WP_001809104.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38136.63 Da
• Isoelectric Point: 8.1692

>NTDB_id=99121 SP4011_RS07000 WP_338618480.1 1347200..1348153(-) (coiA) [Streptococcus parapneumoniae strain SP4011]
MFVARDTRGELVNVLEDKLEKQAYTCPACGGQLRLRQGPSVRTHFAHKTLKDCDFSSENESPEHLANKESLYHWLKTEAE
VQLEYPLPELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSEGYQVLWLLGQKLWLKERLTRLQEGFLYFSQNMGF
YVWEVDKEKQVLRLKYLIHQDLRGKLYYQIKEFPYGQASLLEILRFPYKKQKISYFTVSQDKDICRYIRQQLYYQNPIWM
KEQAEAYQKGENLLTYGLKEWYPQIRPLVGNFCQIEKDLTRYYQYFQTYYQENPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=99121 SP4011_RS07000 WP_338618480.1 1347200..1348153(-) (coiA) [Streptococcus parapneumoniae strain SP4011]
ATGTTTGTTGCGAGAGATACTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAGCTTGAGAAGCAAGCCTACACTTGCCC
AGCTTGTGGAGGTCAGCTCCGTTTGCGTCAAGGACCAAGTGTCCGGACCCATTTTGCCCACAAAACCTTAAAAGACTGTG
ATTTTTCCTCTGAAAATGAAAGTCCAGAACATCTGGCAAATAAAGAATCCCTTTATCACTGGTTGAAAACAGAGGCTGAG
GTACAATTAGAATACCCTCTTCCAGAGCTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTTTAGAGGTTCA
GTGTAGTCCCTTGCCTCAAAAAGTTCTTAAAGAGCGTAGTGAGGGTTATCGTAGTGAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTTTGGCTCAAGGAGCGTTTGACCCGTCTGCAAGAAGGTTTTCTTTATTTCAGTCAAAATATGGGCTTT
TATGTTTGGGAAGTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTCACCAAGACCTCCGTGGTAAACTCTA
TTATCAGATTAAGGAATTTCCCTATGGTCAAGCTAGTCTACTGGAGATATTACGTTTTCCCTATAAGAAACAAAAAATAT
CTTATTTTACAGTTTCTCAGGATAAGGACATCTGTCGCTATATCCGGCAACAACTCTATTATCAAAATCCTATTTGGATG
AAAGAACAAGCAGAAGCCTACCAGAAGGGGGAAAATCTCCTGACTTACGGGCTAAAAGAATGGTATCCACAAATTCGACC
ATTAGTAGGTAATTTTTGCCAAATTGAGAAAGATTTGACTCGCTATTATCAGTATTTTCAAACCTATTATCAAGAAAATC
CTCAAAATGATTGGCAAAAGCTCTATCCACCAGCCTTTTATCAGCAATATTTCTTAAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	93.691	100	0.937
coiA	Streptococcus pneumoniae TIGR4	90.221	100	0.902
coiA	Streptococcus pneumoniae Rx1	90.221	100	0.902
coiA	Streptococcus pneumoniae D39	90.221	100	0.902
coiA	Streptococcus pneumoniae R6	90.221	100	0.902
coiA	Lactococcus lactis subsp. cremoris KW2	42.857	100	0.435