Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | SLO00_RS08000 | Genome accession | NZ_CP152409 |
| Coordinates | 1645799..1646098 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain BSN53 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1640799..1651098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SLO00_RS07975 (SLO00_007980) | gcvPA | 1642011..1643357 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SLO00_RS07980 (SLO00_007985) | gcvT | 1643377..1644468 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SLO00_RS07985 (SLO00_007990) | - | 1644627..1645151 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| SLO00_RS07990 (SLO00_007995) | - | 1645141..1645287 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SLO00_RS07995 (SLO00_008000) | comGF | 1645384..1645881 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SLO00_RS08000 (SLO00_008005) | comGE | 1645799..1646098 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SLO00_RS08005 (SLO00_008010) | comGD | 1646085..1646531 (-) | 447 | WP_001791635.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SLO00_RS08010 (SLO00_008015) | comGC | 1646509..1646820 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SLO00_RS08015 (SLO00_008020) | comGB | 1646834..1647904 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SLO00_RS08020 (SLO00_008025) | comGA | 1647876..1648850 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SLO00_RS08025 (SLO00_008030) | - | 1648902..1649525 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SLO00_RS08030 (SLO00_008035) | - | 1649522..1649851 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SLO00_RS08035 (SLO00_008040) | - | 1649851..1650837 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| SLO00_RS08040 (SLO00_008045) | - | 1650834..1651037 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=988947 SLO00_RS08000 WP_000844413.1 1645799..1646098(-) (comGE) [Staphylococcus aureus strain BSN53]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=988947 SLO00_RS08000 WP_000844413.1 1645799..1646098(-) (comGE) [Staphylococcus aureus strain BSN53]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |