Detailed information    

insolico Bioinformatically predicted

Overview


Name   hexA   Type   Machinery gene
Locus tag   ACNR93_RS08930 Genome accession   NZ_CP184736
Coordinates   1818509..1821079 (-) Length   856 a.a.
NCBI ID   WP_420543623.1    Uniprot ID   -
Organism   Streptococcus equinus strain NM-2-29     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1813509..1826079
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACNR93_RS08910 (ACNR93_08910) - 1813946..1815148 (-) 1203 WP_420543621.1 MFS transporter -
  ACNR93_RS08915 (ACNR93_08915) - 1815271..1815828 (-) 558 WP_198362632.1 DNA-3-methyladenine glycosylase I -
  ACNR93_RS08920 (ACNR93_08920) ruvA 1815858..1816451 (-) 594 WP_024344431.1 Holliday junction branch migration protein RuvA Machinery gene
  ACNR93_RS08925 (ACNR93_08925) hexB 1816452..1818395 (-) 1944 WP_420543622.1 DNA mismatch repair endonuclease MutL Machinery gene
  ACNR93_RS08930 (ACNR93_08930) hexA 1818509..1821079 (-) 2571 WP_420543623.1 DNA mismatch repair protein MutS Machinery gene
  ACNR93_RS08935 (ACNR93_08935) - 1821066..1821419 (-) 354 WP_027968295.1 YlbF family regulator -
  ACNR93_RS08940 (ACNR93_08940) argR 1821416..1821853 (-) 438 WP_021143308.1 arginine repressor -
  ACNR93_RS08945 (ACNR93_08945) argS 1822043..1823734 (+) 1692 WP_420543624.1 arginine--tRNA ligase -
  ACNR93_RS08950 (ACNR93_08950) - 1823879..1825303 (-) 1425 Protein_1697 PTS transporter subunit EIIC -

Sequence


Protein


Download         Length: 856 a.a.        Molecular weight: 96018.26 Da        Isoelectric Point: 4.8397

>NTDB_id=988949 ACNR93_RS08930 WP_420543623.1 1818509..1821079(-) (hexA) [Streptococcus equinus strain NM-2-29]
MAKDKISPGMQQYLDVKKDYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNAENPIPMAGVPYHSAQQYIDVLV
EMGYKVAIAEQMEDPKKAVGVVKREVVQVITPGTAVDSTKPDNANNFLVAIDSDGKTFGLAYMDVSTGEFYATSLSDFAS
LKSEILNLKAREIVVGYELSEEEKHSLVKQLNLLLSFEQERFEDVHLIDSNLASLEISAAEKLLQYVHTTQKRELSHLQK
LVHYEIKDYLQMSYTTKSSLDLLENARTSKKHGSLYWLLDETKTAMGMRLLRNWIDRPLVNREQIEERQNIIQVFLDNFF
ERSDLTDSLKGVYDIERLASRVSFGKANPKDLLQLGHTLGQVPTIKAILESFESPYLDKLVNSIDTLPELESLISSAIDP
DAQAVITEGSIIKTGFDETLDKYRKVMREGTSWIAEIEAKERAASGITNLKIDYNKKDGYYFHVTNSNLSLVPDYFFRKA
TLKNSERFGTAELAKIEGEMLEAREQSASLEYDIFMRVRAQVERYISRLQDLAKAISTVDVLQSLAVVAENNHYVRPTFN
DSHEIKIEKGRHAVVEKVMGTQEYIPNTITFGRNTNIQLITGPNMSGKSTYMRQLALTVIMAQMGSYVAAESVSLPVFDA
IFTRIGAADDLISGQSTFMVEMMEANQAIKRASDKSLILFDELGRGTATYDGMALAQSIIEYIHDHIGAKTMFATHYHEL
TTLSTTLTHLVNVHVATLERNGDVTFLHKIAEGPADKSYGIHVAKIAGLPEDLLQRADSILTNLESGAAQLHLTPEVDSE
PLATESEVSEPVAEQLSLFAEDSSNQEVIEALKKVDLMNLTPMQAMNVIYELKNML

Nucleotide


Download         Length: 2571 bp        

>NTDB_id=988949 ACNR93_RS08930 WP_420543623.1 1818509..1821079(-) (hexA) [Streptococcus equinus strain NM-2-29]
ATGGCAAAAGATAAAATTTCTCCAGGCATGCAACAGTATTTGGATGTTAAAAAAGACTATCCAGATGCTTTTTTACTTTT
CCGCATGGGAGATTTTTACGAATTATTTTACGATGATGCAGTTAAGGCTGCACAGATTTTAGAGATTAGTTTGACTAGTC
GAAATAAAAACGCTGAAAATCCTATTCCAATGGCAGGGGTACCATATCACTCAGCTCAGCAATATATTGATGTCCTTGTT
GAAATGGGCTACAAAGTTGCGATTGCAGAACAAATGGAAGATCCCAAGAAAGCAGTCGGTGTTGTAAAACGTGAAGTTGT
TCAAGTCATTACGCCAGGTACGGCAGTTGATTCGACAAAACCTGACAATGCCAATAATTTCTTGGTGGCTATTGATTCTG
ATGGCAAGACTTTTGGTCTAGCTTACATGGATGTGTCGACAGGTGAGTTTTATGCGACAAGTCTGTCAGATTTTGCCAGT
CTTAAAAGTGAAATCCTAAACCTTAAAGCACGTGAGATTGTTGTTGGCTACGAACTTTCAGAAGAAGAAAAACACAGTCT
TGTTAAACAACTCAACTTGCTTTTATCGTTTGAACAAGAGCGTTTTGAAGATGTACACTTGATTGATTCTAATTTGGCCT
CTTTGGAGATTTCAGCTGCTGAGAAATTACTACAGTACGTCCATACCACTCAAAAACGTGAGCTCAGCCATTTGCAAAAA
TTGGTTCACTATGAAATCAAAGATTATCTTCAAATGTCTTATACGACAAAATCAAGTCTTGATTTATTAGAAAATGCACG
TACAAGCAAGAAACACGGTAGTCTTTATTGGTTACTTGATGAGACAAAGACAGCTATGGGGATGCGTCTTTTGCGCAATT
GGATCGACCGTCCTTTGGTTAATCGAGAACAAATCGAAGAACGTCAAAATATCATTCAAGTTTTCTTAGACAATTTCTTT
GAGCGTAGTGATTTGACAGATAGTCTTAAGGGTGTTTATGATATTGAACGCTTGGCGAGTCGTGTGTCATTTGGTAAGGC
TAATCCAAAAGACCTTCTTCAACTTGGTCATACTTTGGGGCAAGTGCCTACTATCAAGGCTATTTTGGAATCCTTTGAAA
GTCCATACCTTGACAAACTTGTCAACAGCATTGACACTCTTCCTGAGTTGGAATCATTGATTAGCTCTGCTATTGACCCA
GATGCTCAAGCTGTTATCACAGAAGGTAGCATCATTAAAACTGGTTTTGATGAGACTTTGGATAAATACCGCAAAGTCAT
GCGTGAAGGCACAAGCTGGATTGCTGAGATTGAAGCTAAAGAACGTGCCGCAAGTGGTATTACAAATCTAAAAATTGATT
ACAATAAAAAAGATGGCTATTATTTCCATGTCACAAATTCTAACCTTTCTTTAGTACCAGATTATTTCTTCCGTAAAGCA
ACTTTGAAGAATTCAGAACGTTTTGGTACGGCAGAACTGGCTAAAATTGAAGGTGAAATGTTAGAAGCGCGTGAACAATC
AGCGAGCCTAGAATACGATATTTTCATGCGTGTTCGTGCGCAGGTTGAACGTTATATTTCACGTTTGCAAGACTTGGCAA
AAGCCATTTCAACAGTCGATGTTTTGCAAAGTTTAGCTGTGGTTGCTGAAAACAATCATTATGTGCGTCCAACTTTCAAT
GATAGCCATGAGATTAAGATTGAAAAAGGTCGTCACGCAGTCGTTGAAAAAGTCATGGGAACTCAGGAATATATTCCAAA
TACGATTACATTTGGTAGAAATACTAATATTCAGCTGATTACTGGTCCTAATATGAGTGGTAAGTCAACGTATATGCGTC
AGCTAGCATTGACTGTTATCATGGCACAAATGGGGTCTTATGTCGCTGCTGAAAGTGTCAGCCTACCAGTCTTCGATGCT
ATTTTCACACGTATTGGTGCAGCTGATGACTTGATTTCAGGTCAGTCAACCTTCATGGTAGAAATGATGGAAGCTAACCA
AGCTATTAAACGTGCTAGTGATAAGTCTTTGATTCTCTTTGATGAATTGGGACGTGGTACGGCTACCTATGATGGTATGG
CTTTGGCACAATCTATTATTGAGTATATTCACGACCATATTGGGGCTAAAACGATGTTTGCAACACACTATCATGAATTG
ACAACTCTGTCAACGACGTTGACACACCTTGTCAACGTCCATGTTGCAACCCTTGAACGTAATGGTGATGTGACTTTCCT
TCACAAGATTGCAGAAGGACCAGCTGATAAATCCTATGGTATTCACGTTGCAAAAATTGCAGGCCTACCAGAAGACTTAT
TGCAGCGTGCAGACAGCATTTTAACTAATCTTGAATCAGGTGCTGCGCAGCTTCATTTGACACCAGAAGTTGACAGTGAA
CCATTAGCAACTGAGTCAGAAGTTTCAGAACCTGTAGCGGAGCAATTAAGTCTTTTTGCAGAAGATTCTTCTAATCAAGA
AGTGATTGAAGCACTTAAGAAAGTTGATTTGATGAACTTGACACCTATGCAGGCTATGAATGTCATCTATGAATTGAAAA
ATATGTTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexA Streptococcus pneumoniae R6

72.196

100

0.722

  mutS Pseudomonas stutzeri strain ATCC 17587

37.716

100

0.382


Multiple sequence alignment