Detailed information NTG0988759

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AAGT77_RS03365
• Genome accession: NZ_CP152380
• Coordinates: 731401..732465 (+)
• Length: 354 a.a.
• NCBI ID: WP_342631840.1
• Uniprot ID: -
• Organism: Marinobacter alkaliphilus strain SBY-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 726401..737465

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGT77_RS03350 (AAGT77_03350)	rpmE	726840..727061 (+)	222	WP_058090079.1	50S ribosomal protein L31	-
AAGT77_RS03355 (AAGT77_03355)	-	727278..728543 (+)	1266	WP_061332389.1	malic enzyme-like NAD(P)-binding protein	-
AAGT77_RS03360 (AAGT77_03360)	-	728634..731162 (-)	2529	WP_342631839.1	penicillin-binding protein 1A	-
AAGT77_RS03365 (AAGT77_03365)	pilM	731401..732465 (+)	1065	WP_342631840.1	pilus assembly protein PilM	Machinery gene
AAGT77_RS03370 (AAGT77_03370)	-	732465..733028 (+)	564	WP_072678329.1	PilN domain-containing protein	-
AAGT77_RS03375 (AAGT77_03375)	-	733028..733639 (+)	612	WP_342631841.1	type 4a pilus biogenesis protein PilO	-
AAGT77_RS03380 (AAGT77_03380)	-	733642..734184 (+)	543	WP_342631842.1	pilus assembly protein PilP	-
AAGT77_RS03385 (AAGT77_03385)	pilQ	734203..736317 (+)	2115	WP_138438138.1	type IV pilus secretin PilQ	Machinery gene
AAGT77_RS03390 (AAGT77_03390)	aroK	736441..737025 (+)	585	WP_342631843.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38104.26 Da
• Isoelectric Point: 4.1974

>NTDB_id=988759 AAGT77_RS03365 WP_342631840.1 731401..732465(+) (pilM) [Marinobacter alkaliphilus strain SBY-1]
MFGLLGKKSSAVLGVDVSSSSVKLLELSRHGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVLKRVASKSRTGVKQVAV
AVSGSAVITKLIQMDGGLNEFEMEDQITLEADQYIPYPLDEVAIDFEVQGPSETNPDQVDVLLAACRKENVDIREDALEI
AGLTTKIVDVEAYALERAYKLIEPQLESQGEELVVAIVDIGATMTTLSVLAEGKTVYTREQIFGGKQLTEEIQRRYGLSL
EEAGLAKKQGGLPDDYEPEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTLVANP
FADMAVGSRVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=988759 AAGT77_RS03365 WP_342631840.1 731401..732465(+) (pilM) [Marinobacter alkaliphilus strain SBY-1]
GTGTTCGGATTGCTAGGAAAAAAATCCAGTGCGGTGCTGGGCGTGGATGTCAGCTCCAGCTCGGTCAAACTTCTGGAACT
GTCAAGGCATGGCGACCGTTACAAGGTTGAAAGCTATGCGGTTGAGCCGTTACCGGCCAACGCAGTTGTCGAGAAAAACA
TCACTGATGTAGAAGCGGTGGGTGAGGTGCTCAAGCGAGTGGCCTCTAAATCCCGTACCGGCGTCAAGCAGGTTGCCGTG
GCTGTGTCAGGTTCTGCAGTTATCACCAAGCTCATCCAGATGGATGGCGGCCTCAACGAGTTCGAGATGGAAGACCAGAT
CACCCTCGAGGCCGATCAGTACATCCCGTATCCGCTGGATGAAGTAGCTATCGATTTTGAGGTGCAGGGTCCGTCTGAGA
CGAATCCGGACCAGGTCGACGTGCTGCTGGCTGCGTGCAGAAAAGAGAACGTGGATATCCGTGAGGACGCTCTCGAGATT
GCCGGCCTGACTACCAAGATCGTCGATGTCGAAGCTTATGCACTGGAAAGGGCGTACAAACTGATTGAACCCCAGTTGGA
GTCCCAGGGGGAAGAGCTGGTGGTTGCCATCGTCGATATCGGCGCAACTATGACCACGCTGAGTGTGCTGGCTGAGGGCA
AGACAGTTTATACCCGTGAGCAGATTTTCGGGGGCAAGCAGCTTACCGAGGAAATTCAGCGCCGCTACGGCTTATCACTT
GAAGAAGCCGGCCTGGCCAAGAAACAGGGCGGGCTCCCGGATGACTACGAGCCGGAGGTGCTTACCCCCTTCCGTGAGGC
GGTTGTGCAGCAAGTTGCACGCGCTCTCCAGTTCTTCTTTGGCGCCAGCCAGTACAACGCCGTTGATTACGTCGTTCTTG
CGGGCGGTACGGCATCCATTCAGGGCCTGACCGAGATGGTGGAGGAGAAGACCGGTACGCCAACCCTGGTTGCGAATCCA
TTCGCCGACATGGCCGTGGGTTCCAGAGTGAATGCATCAGCCCTGAGCAATGATGCTCCATCGTTGATGATTGCCTGCGG
CCTGGCAATGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	53.672	100	0.537
comM	Acinetobacter nosocomialis M2	53.672	100	0.537
comM	Acinetobacter baylyi ADP1	51.412	100	0.514
pilM	Legionella pneumophila strain ERS1305867	45.48	100	0.455