Detailed information NTG0985471

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MHI23_RS16415
• Genome accession: NZ_CP152024
• Coordinates: 3181983..3182639 (-)
• Length: 218 a.a.
• NCBI ID: WP_241218534.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M7-0003
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176983..3187639

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI23_RS16380 (MHI23_16380)	fliW	3177121..3177555 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
MHI23_RS16385 (MHI23_16385)	-	3177584..3178162 (-)	579	WP_024426253.1	DUF6470 family protein	-
MHI23_RS16390 (MHI23_16390)	flgL	3178209..3179117 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
MHI23_RS16395 (MHI23_16395)	flgK	3179127..3180647 (-)	1521	WP_342492100.1	flagellar hook-associated protein FlgK	-
MHI23_RS16400 (MHI23_16400)	-	3180663..3181145 (-)	483	WP_087977062.1	flagellar protein FlgN	-
MHI23_RS16405 (MHI23_16405)	flgM	3181164..3181427 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
MHI23_RS16410 (MHI23_16410)	-	3181507..3181926 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
MHI23_RS16415 (MHI23_16415)	comFC	3181983..3182639 (-)	657	WP_241218534.1	ComF family protein	Machinery gene
MHI23_RS16420 (MHI23_16420)	-	3182666..3182959 (-)	294	WP_024423623.1	competence protein ComFB	-
MHI23_RS16425 (MHI23_16425)	comFA	3183008..3184405 (-)	1398	WP_277600436.1	DEAD/DEAH box helicase	Machinery gene
MHI23_RS16430 (MHI23_16430)	-	3184526..3185368 (-)	843	WP_024423625.1	DegV family protein	-
MHI23_RS16435 (MHI23_16435)	degU	3185584..3186273 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MHI23_RS16440 (MHI23_16440)	degS	3186338..3187513 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24965.09 Da
• Isoelectric Point: 9.9287

>NTDB_id=985471 MHI23_RS16415 WP_241218534.1 3181983..3182639(-) (comFC) [Bacillus sp. FSL M7-0003]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNRWNERSDSIKILVKNRSVYTYNELMKDVLA
RFKFRGDTALAELFQKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=985471 MHI23_RS16415 WP_241218534.1 3181983..3182639(-) (comFC) [Bacillus sp. FSL M7-0003]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGCCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTGTGCCAGGACTGTAACAGATGGAATG
AACGCTCTGATTCTATTAAAATCCTTGTGAAAAATAGGTCAGTTTATACTTACAACGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTCAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATTCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATAAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362