Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | MKX52_RS11045 | Genome accession | NZ_CP152014 |
| Coordinates | 2171369..2171704 (+) | Length | 111 a.a. |
| NCBI ID | WP_012010555.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0422 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2166369..2176704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MKX52_RS11025 (MKX52_11025) | gcvT | 2166848..2167945 (-) | 1098 | WP_342490698.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| MKX52_RS11030 (MKX52_11030) | - | 2168507..2170177 (+) | 1671 | WP_342490699.1 | SNF2-related protein | - |
| MKX52_RS11035 (MKX52_11035) | - | 2170192..2170989 (+) | 798 | WP_151020941.1 | YqhG family protein | - |
| MKX52_RS11040 (MKX52_11040) | - | 2171171..2171335 (+) | 165 | WP_003217357.1 | anti-repressor SinI family protein | - |
| MKX52_RS11045 (MKX52_11045) | sinR | 2171369..2171704 (+) | 336 | WP_012010555.1 | transcriptional regulator SinR | Regulator |
| MKX52_RS11050 (MKX52_11050) | - | 2171772..2172572 (-) | 801 | WP_119125106.1 | TasA family protein | - |
| MKX52_RS11055 (MKX52_11055) | - | 2172630..2173202 (-) | 573 | WP_342490700.1 | signal peptidase I | - |
| MKX52_RS11060 (MKX52_11060) | tapA | 2173254..2173781 (-) | 528 | WP_342490701.1 | amyloid fiber anchoring/assembly protein TapA | - |
| MKX52_RS11065 (MKX52_11065) | - | 2174081..2174359 (+) | 279 | WP_061827416.1 | DUF3889 domain-containing protein | - |
| MKX52_RS11070 (MKX52_11070) | - | 2174393..2174587 (-) | 195 | WP_012010560.1 | YqzE family protein | - |
| MKX52_RS11075 (MKX52_11075) | comGG | 2174647..2175030 (-) | 384 | WP_342490702.1 | competence type IV pilus minor pilin ComGG | - |
| MKX52_RS11080 (MKX52_11080) | comGF | 2175027..2175527 (-) | 501 | WP_342490703.1 | competence type IV pilus minor pilin ComGF | - |
| MKX52_RS11085 (MKX52_11085) | comGE | 2175466..2175783 (-) | 318 | WP_012010563.1 | competence type IV pilus minor pilin ComGE | - |
| MKX52_RS11090 (MKX52_11090) | comGD | 2175767..2176213 (-) | 447 | WP_342490704.1 | competence type IV pilus minor pilin ComGD | - |
| MKX52_RS11095 (MKX52_11095) | comGC | 2176206..2176499 (-) | 294 | WP_012010565.1 | competence type IV pilus major pilin ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 13001.59 Da Isoelectric Point: 5.2831
>NTDB_id=984972 MKX52_RS11045 WP_012010555.1 2171369..2171704(+) (sinR) [Bacillus sp. FSL R5-0422]
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
MIGQRIKQYRNEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLHEKDETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQIWRKKQEEE
Nucleotide
Download Length: 336 bp
>NTDB_id=984972 MKX52_RS11045 WP_012010555.1 2171369..2171704(+) (sinR) [Bacillus sp. FSL R5-0422]
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
TTGATTGGCCAGCGTATTAAACAATACCGCAATGAAAAAGGCTACTCACTATCAGAACTGGCCGAAAAGGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTTGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACACTGTTACACGAAAAAGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAAAAA
CTAGTTCGAGATGCAATGACATCAGGGGTTTCGAAAAAGCAATTTCGTGAATTTTTAGATTATCAAATCTGGAGAAAAAA
GCAAGAAGAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
94.595 |
100 |
0.946 |