Detailed information NTG0098484

Bioinformatically predicted

Overview

• Name: comB
• Type: Regulator
• Locus tag: R8611_RS00270
• Genome accession: NZ_AP026927
• Coordinates: 47369..48718 (+)
• Length: 449 a.a.
• NCBI ID: WP_000801618.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700178
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 42369..53718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8611_RS00250 (PC0174_00430)	-	43276..43758 (+)	483	WP_001232094.1	stage II sporulation protein M	-
R8611_RS00255 (PC0174_00440)	-	43755..44351 (+)	597	WP_000687787.1	ATP-binding cassette domain-containing protein	-
R8611_RS00260 (PC0174_00450)	-	44332..44823 (+)	492	WP_000671990.1	hypothetical protein	-
R8611_RS00265 (PC0174_00460)	comA	45203..47356 (+)	2154	WP_000668291.1	peptide cleavage/export ABC transporter ComA	Regulator
R8611_RS00270 (PC0174_00470)	comB	47369..48718 (+)	1350	WP_000801618.1	competence pheromone export protein ComB	Regulator
R8611_RS00275 (PC0174_00480)	purC	48888..49595 (+)	708	WP_050142027.1	phosphoribosylaminoimidazolesuccinocarboxamide synthase	-
R8611_RS00280	-	49597..49740 (+)	144	WP_050167432.1	hypothetical protein	-
R8611_RS00285 (PC0174_00490)	-	49797..53522 (+)	3726	WP_050142025.1	phosphoribosylformylglycinamidine synthase	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 49615.49 Da
• Isoelectric Point: 5.3895

>NTDB_id=98484 R8611_RS00270 WP_000801618.1 47369..48718(+) (comB) [Streptococcus pneumoniae strain PZ900700178]
MKPEFLESAEFYNRRYHNFSSSVIVPMALLLVFLLGFATVAEKEMSLSTRATVEPSRILANIQSTSNNRILVNHLEENKL
VKKGDLLVQYQEGAEGVQAESYASQLDMLKDQKKQLEYLQKSLQEGENHFPEEDKFGYQATFRDYISQAGSLRASTSQQN
ETIASQNAAASQTQAEIGNLISQTEAKIRDYQTAKSAMETGASLASQNLAYSLYQSYKSQGEENPQTKVQAVAQVEAQIS
QLESSLATYRVQYAGSGTQQAYASGLSSQLESLKSQHLAKVGQELTLLAQKILEAESGKKVQGNLLDKGKITASEDGVLH
LNPETSDSSMVAEGALLAQLYPSLEREGKAKLTAYLSSKDVARIKVGDSVRYTTTHDAGNQLFLDSTITSIDATATKTEK
GNFFKIEAETNLTSEQAEKLRYGVEGRLQMITGKKSYLRYYLDQFLNKE

Nucleotide

• Length: 1350 bp

>NTDB_id=98484 R8611_RS00270 WP_000801618.1 47369..48718(+) (comB) [Streptococcus pneumoniae strain PZ900700178]
ATGAAACCAGAATTTTTAGAAAGTGCGGAGTTTTATAATCGTCGTTACCATAATTTTTCCAGTAGTGTGATTGTACCCAT
GGCCCTTCTGCTCGTGTTTTTACTTGGCTTTGCAACTGTTGCAGAAAAGGAGATGAGTTTGTCCACTAGAGCTACTGTCG
AACCTAGTCGTATCCTTGCAAATATCCAGTCAACTAGCAACAATCGTATTCTTGTCAATCATTTGGAAGAAAATAAGCTG
GTTAAGAAGGGGGATCTTTTGGTTCAATACCAAGAAGGGGCAGAGGGTGTCCAAGCGGAGTCCTATGCCAGTCAGTTGGA
CATGCTAAAGGATCAAAAAAAGCAATTGGAGTATCTGCAAAAGAGCCTGCAAGAAGGGGAGAACCACTTTCCAGAGGAGG
ATAAGTTTGGCTACCAAGCCACCTTTCGCGACTACATCAGTCAAGCAGGCAGTCTTAGGGCTAGTACATCGCAACAAAAT
GAGACCATCGCGTCCCAGAATGCAGCAGCTAGCCAAACCCAAGCCGAAATCGGCAACCTCATCAGTCAAACAGAGGCTAA
AATTCGCGATTACCAGACAGCTAAGTCAGCTATGGAAACAGGTGCTTCCTTGGCCAGTCAGAATCTAGCCTACTCTCTTT
ACCAGTCCTACAAGTCTCAGGGTGAGGAAAATCCCCAAACTAAGGTTCAGGCAGTTGCACAGGTTGAAGCACAGATTTCT
CAGTTAGAATCTAGTCTTGCTACTTACCGTGTCCAGTATGCAGGTTCAGGTACCCAGCAAGCCTATGCGTCAGGGTTAAG
CAGTCAATTGGAATCCCTTAAATCCCAACATTTGGCAAAGGTTGGTCAGGAATTGACCCTTCTAGCCCAGAAAATCTTGG
AGGCAGAGTCAGGTAAGAAGGTACAGGGAAATCTTTTAGACAAGGGGAAAATTACGGCGAGTGAGGATGGGGTGCTTCAT
CTTAATCCTGAGACCAGTGATTCTAGCATGGTTGCAGAAGGTGCCCTACTAGCCCAACTTTATCCATCTTTGGAAAGAGA
AGGGAAAGCCAAACTCACAGCCTATCTAAGTTCAAAAGATGTAGCAAGAATCAAGGTCGGTGATTCTGTTCGCTATACTA
CGACTCATGATGCCGGGAATCAACTTTTCCTAGATTCAACTATTACAAGTATTGATGCGACAGCTACTAAGACTGAGAAA
GGGAATTTCTTTAAAATCGAGGCGGAGACTAATCTAACTTCGGAGCAGGCTGAAAAACTTAGGTACGGGGTGGAAGGCCG
CTTGCAGATGATTACGGGCAAGAAAAGTTATCTACGTTATTATTTGGATCAATTTTTGAACAAAGAGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comB	Streptococcus pneumoniae TIGR4	99.109	100	0.991
comB	Streptococcus pneumoniae Rx1	98.886	100	0.989
comB	Streptococcus pneumoniae D39	98.886	100	0.989
comB	Streptococcus pneumoniae R6	98.886	100	0.989
comB	Streptococcus mitis SK321	95.1	100	0.951
comB	Streptococcus mitis NCTC 12261	94.655	100	0.947
comB	Streptococcus gordonii str. Challis substr. CH1	55.333	100	0.555