Detailed information NTG0984644

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: MKZ22_RS17905
• Genome accession: NZ_CP152009
• Coordinates: 3408797..3409483 (-)
• Length: 228 a.a.
• NCBI ID: WP_181462031.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R7-0675
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3403797..3414483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKZ22_RS17870 (MKZ22_17870)	fliW	3403930..3404364 (-)	435	WP_044139341.1	flagellar assembly protein FliW	-
MKZ22_RS17875 (MKZ22_17875)	-	3404393..3404971 (-)	579	WP_003213106.1	DUF6470 family protein	-
MKZ22_RS17880 (MKZ22_17880)	flgL	3405020..3405931 (-)	912	WP_044139340.1	flagellar hook-associated protein FlgL	-
MKZ22_RS17885 (MKZ22_17885)	flgK	3405941..3407461 (-)	1521	WP_044139339.1	flagellar hook-associated protein FlgK	-
MKZ22_RS17890 (MKZ22_17890)	-	3407477..3407959 (-)	483	WP_034660146.1	flagellar protein FlgN	-
MKZ22_RS17895 (MKZ22_17895)	flgM	3407978..3408241 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
MKZ22_RS17900 (MKZ22_17900)	-	3408321..3408740 (-)	420	WP_044139338.1	TIGR03826 family flagellar region protein	-
MKZ22_RS17905 (MKZ22_17905)	comFC	3408797..3409483 (-)	687	WP_181462031.1	ComF family protein	Machinery gene
MKZ22_RS17910 (MKZ22_17910)	-	3409480..3409773 (-)	294	WP_044139337.1	competence protein ComFB	-
MKZ22_RS17915 (MKZ22_17915)	comFA	3409840..3411219 (-)	1380	WP_142671660.1	DEAD/DEAH box helicase	Machinery gene
MKZ22_RS17920 (MKZ22_17920)	-	3411339..3412181 (-)	843	WP_044139336.1	DegV family protein	-
MKZ22_RS17925 (MKZ22_17925)	degU	3412399..3413088 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
MKZ22_RS17930 (MKZ22_17930)	degS	3413153..3414328 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26014.45 Da
• Isoelectric Point: 9.8032

>NTDB_id=984644 MKZ22_RS17905 WP_181462031.1 3408797..3409483(-) (comFC) [Bacillus sp. FSL R7-0675]
MICLICEGHFVASFTWKSLLLLNDDRLCIACKHHLEKIQRPICPACGRAQSSDQLCQDCSRWKERPDSTSLLVKNRSVYA
YNDLMKEVLSRFKFRGDTALAELFKQDVQVVFKRSFSIKEPVLIPIPLSKERLKERGFNQSVILASLIGEPILQPLVKIH
QTKQSKKKKNERLDQKGMFQIKQTDAIVQRDVILIDDIYTTGATIYDAARILKEAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=984644 MKZ22_RS17905 WP_181462031.1 3408797..3409483(-) (comFC) [Bacillus sp. FSL R7-0675]
TTGATCTGCCTCATTTGTGAGGGGCATTTTGTCGCTTCTTTTACATGGAAATCATTACTTCTATTAAATGATGATCGTCT
ATGTATAGCATGTAAGCATCACCTAGAAAAAATTCAACGCCCGATTTGTCCAGCCTGCGGGAGAGCACAGTCGAGCGATC
AATTATGTCAAGACTGTTCCAGGTGGAAAGAACGCCCTGATTCTACTTCATTACTTGTGAAAAATAGGTCTGTCTATGCT
TACAACGATTTGATGAAAGAGGTCCTTTCCCGCTTTAAATTTCGAGGTGATACAGCTTTAGCTGAGCTTTTTAAACAAGA
TGTCCAAGTAGTATTTAAGCGCTCTTTTTCAATTAAAGAACCTGTGCTGATCCCGATTCCTTTAAGTAAAGAAAGACTAA
AGGAAAGAGGGTTTAATCAGTCCGTCATACTTGCTTCCTTGATTGGTGAGCCGATCCTTCAGCCACTTGTGAAAATACAT
CAAACCAAACAGTCCAAGAAAAAGAAAAATGAACGTTTAGATCAAAAAGGAATGTTTCAAATCAAACAGACAGATGCGAT
CGTTCAAAGGGATGTTATCTTAATTGACGACATTTATACAACAGGGGCCACCATTTATGATGCGGCGAGAATTTTAAAAG
AAGCAGGTGCCAAAAGTGTTTCCTCTTTTACGTTGATCCGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (142-226)

• Double zinc ribbon domain (DZR_2) (3-59)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	51.304	100	0.518
comFC/cflB	Streptococcus mitis SK321	39.565	100	0.399
comFC/cflB	Streptococcus pneumoniae D39	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae R6	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae TIGR4	38.865	100	0.39
comFC/cflB	Streptococcus pneumoniae Rx1	38.865	100	0.39
comFC/cflB	Streptococcus mitis NCTC 12261	38.865	100	0.39