Detailed information NTG0983576

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSU13_RS16350
• Genome accession: NZ_CP151986
• Coordinates: 3153954..3154610 (-)
• Length: 218 a.a.
• NCBI ID: WP_227001684.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL M8-0049
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3148954..3159610

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSU13_RS16315 (NSU13_16315)	fliW	3149092..3149526 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSU13_RS16320 (NSU13_16320)	-	3149555..3150133 (-)	579	WP_024426253.1	DUF6470 family protein	-
NSU13_RS16325 (NSU13_16325)	flgL	3150180..3151088 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSU13_RS16330 (NSU13_16330)	flgK	3151098..3152618 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSU13_RS16335 (NSU13_16335)	-	3152634..3153116 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSU13_RS16340 (NSU13_16340)	flgM	3153135..3153398 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSU13_RS16345 (NSU13_16345)	-	3153478..3153897 (-)	420	WP_342489637.1	TIGR03826 family flagellar region protein	-
NSU13_RS16350 (NSU13_16350)	comFC	3153954..3154610 (-)	657	WP_227001684.1	ComF family protein	Machinery gene
NSU13_RS16355 (NSU13_16355)	-	3154637..3154930 (-)	294	WP_024423623.1	competence protein ComFB	-
NSU13_RS16360 (NSU13_16360)	comFA	3154979..3156376 (-)	1398	WP_254001458.1	DEAD/DEAH box helicase	Machinery gene
NSU13_RS16365 (NSU13_16365)	-	3156497..3157339 (-)	843	WP_024423625.1	DegV family protein	-
NSU13_RS16370 (NSU13_16370)	degU	3157555..3158244 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSU13_RS16375 (NSU13_16375)	degS	3158309..3159484 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24868.96 Da
• Isoelectric Point: 9.9287

>NTDB_id=983576 NSU13_RS16350 WP_227001684.1 3153954..3154610(-) (comFC) [Bacillus sp. FSL M8-0049]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNSWNERSDSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAVVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983576 NSU13_RS16350 WP_227001684.1 3153954..3154610(-) (comFC) [Bacillus sp. FSL M8-0049]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAACGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGGTTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362