Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | NSS80_RS05310 | Genome accession | NZ_CP151985 |
| Coordinates | 1052341..1052919 (+) | Length | 192 a.a. |
| NCBI ID | WP_041117040.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL M8-0350 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1047341..1057919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSS80_RS05290 (NSS80_05290) | - | 1047835..1049130 (-) | 1296 | WP_024426546.1 | globin-coupled sensor protein | - |
| NSS80_RS05295 (NSS80_05295) | - | 1049224..1050756 (-) | 1533 | WP_041117038.1 | FAD-dependent oxidoreductase | - |
| NSS80_RS05300 (NSS80_05300) | - | 1050898..1051758 (+) | 861 | WP_034282185.1 | SDR family oxidoreductase | - |
| NSS80_RS05305 (NSS80_05305) | - | 1051815..1052051 (-) | 237 | WP_008348804.1 | IDEAL domain-containing protein | - |
| NSS80_RS05310 (NSS80_05310) | comK | 1052341..1052919 (+) | 579 | WP_041117040.1 | competence protein ComK | Regulator |
| NSS80_RS05315 (NSS80_05315) | - | 1053218..1053700 (+) | 483 | WP_041117042.1 | hypothetical protein | - |
| NSS80_RS05320 (NSS80_05320) | - | 1053983..1054258 (+) | 276 | WP_041117044.1 | barstar family protein | - |
| NSS80_RS05325 (NSS80_05325) | ceuB | 1054420..1055370 (+) | 951 | WP_041117046.1 | ABC transporter permease | Machinery gene |
| NSS80_RS05330 (NSS80_05330) | - | 1055363..1056313 (+) | 951 | WP_041117048.1 | iron chelate uptake ABC transporter family permease subunit | - |
| NSS80_RS05335 (NSS80_05335) | - | 1056304..1057062 (+) | 759 | WP_041117050.1 | ATP-binding cassette domain-containing protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22292.33 Da Isoelectric Point: 8.7962
>NTDB_id=983474 NSS80_RS05310 WP_041117040.1 1052341..1052919(+) (comK) [Bacillus sp. FSL M8-0350]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQAVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVTFTNEQAVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNKY
Nucleotide
Download Length: 579 bp
>NTDB_id=983474 NSS80_RS05310 WP_041117040.1 1052341..1052919(+) (comK) [Bacillus sp. FSL M8-0350]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAGCCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTTATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GCTGCAGATTCTTCGGCTCAAGCTATGCAGGCAGAAAGGCGGGAACATACGAAGTAACAGGAATTTCTCACAAACCCCCA
ATTGTGATTGACTCATCCAATCATCTGTATTTTTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAAGAATCATCCCTCGGAGACACGGTGGTCACCTTTACAAACGAGCAAGCCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACCGGACAGCATATCTCCGAACGAAATTTCAAGATCGTCTCGATGGA
GGTCTTCCGAAGAAACAAGAATTTATGCTGTATCCAAAAGAACAGCAGCTCAATCTCGTATACGATTTTATATTAAGGGA
GCTTCGAAACAAATATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
60.938 |
100 |
0.609 |