Detailed information NTG0983331

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSQ25_RS16295
• Genome accession: NZ_CP151982
• Coordinates: 3154012..3154668 (-)
• Length: 218 a.a.
• NCBI ID: WP_326135853.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0512
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3149012..3159668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ25_RS16260 (NSQ25_16260)	fliW	3149150..3149584 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSQ25_RS16265 (NSQ25_16265)	-	3149613..3150191 (-)	579	WP_326135852.1	DUF6470 family protein	-
NSQ25_RS16270 (NSQ25_16270)	flgL	3150238..3151146 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSQ25_RS16275 (NSQ25_16275)	flgK	3151156..3152676 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSQ25_RS16280 (NSQ25_16280)	-	3152692..3153174 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSQ25_RS16285 (NSQ25_16285)	flgM	3153193..3153456 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSQ25_RS16290 (NSQ25_16290)	-	3153536..3153955 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSQ25_RS16295 (NSQ25_16295)	comFC	3154012..3154668 (-)	657	WP_326135853.1	ComF family protein	Machinery gene
NSQ25_RS16300 (NSQ25_16300)	-	3154695..3154988 (-)	294	WP_024423623.1	competence protein ComFB	-
NSQ25_RS16305 (NSQ25_16305)	comFA	3155037..3156434 (-)	1398	WP_326135854.1	DEAD/DEAH box helicase	Machinery gene
NSQ25_RS16310 (NSQ25_16310)	-	3156555..3157397 (-)	843	WP_024423625.1	DegV family protein	-
NSQ25_RS16315 (NSQ25_16315)	degU	3157613..3158302 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ25_RS16320 (NSQ25_16320)	degS	3158367..3159542 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24882.99 Da
• Isoelectric Point: 9.9287

>NTDB_id=983331 NSQ25_RS16295 WP_326135853.1 3154012..3154668(-) (comFC) [Bacillus sp. FSL R5-0512]
MPAFTWKSFLLLNDDRLCVACKNHLVKIERPICPTCGRAQSNDQLCQDCNSWNERSDSIKVLVKNRSVYTYSELMKDVLA
RFKFRGDTALAELFKRDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983331 NSQ25_RS16295 WP_326135853.1 3154012..3154668(-) (comFC) [Bacillus sp. FSL R5-0512]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGAGCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTATTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAGCGAGTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAGAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

• Double zinc ribbon domain (DZR_2) (14-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.537	99.083	0.491
comFC/cflB	Streptococcus pneumoniae Rx1	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae D39	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae R6	36.744	98.624	0.362
comFC/cflB	Streptococcus pneumoniae TIGR4	36.744	98.624	0.362