Detailed information NTG0983334

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NSQ25_RS16320
• Genome accession: NZ_CP151982
• Coordinates: 3158367..3159542 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL R5-0512
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3153367..3164542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ25_RS16290 (NSQ25_16290)	-	3153536..3153955 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSQ25_RS16295 (NSQ25_16295)	comFC	3154012..3154668 (-)	657	WP_326135853.1	ComF family protein	Machinery gene
NSQ25_RS16300 (NSQ25_16300)	-	3154695..3154988 (-)	294	WP_024423623.1	competence protein ComFB	-
NSQ25_RS16305 (NSQ25_16305)	comFA	3155037..3156434 (-)	1398	WP_326135854.1	DEAD/DEAH box helicase	Machinery gene
NSQ25_RS16310 (NSQ25_16310)	-	3156555..3157397 (-)	843	WP_024423625.1	DegV family protein	-
NSQ25_RS16315 (NSQ25_16315)	degU	3157613..3158302 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSQ25_RS16320 (NSQ25_16320)	degS	3158367..3159542 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
NSQ25_RS16325 (NSQ25_16325)	-	3159763..3160431 (+)	669	WP_012011434.1	YigZ family protein	-
NSQ25_RS16330 (NSQ25_16330)	-	3160416..3161507 (+)	1092	WP_034281103.1	LCP family protein	-
NSQ25_RS16335 (NSQ25_16335)	-	3161543..3162610 (-)	1068	WP_024423627.1	MraY family glycosyltransferase	-
NSQ25_RS16340 (NSQ25_16340)	-	3162745..3163941 (-)	1197	WP_041108506.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=983334 NSQ25_RS16320 WP_003213166.1 3158367..3159542(-) (degS) [Bacillus sp. FSL R5-0512]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=983334 NSQ25_RS16320 WP_003213166.1 3158367..3159542(-) (degS) [Bacillus sp. FSL R5-0512]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGACTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGATGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841