Detailed information NTG0983209

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: NSS96_RS16585
• Genome accession: NZ_CP151980
• Coordinates: 3205575..3206231 (-)
• Length: 218 a.a.
• NCBI ID: WP_260983460.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL W7-1336
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3200575..3211231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSS96_RS16550 (NSS96_16550)	fliW	3200713..3201147 (-)	435	WP_024423615.1	flagellar assembly protein FliW	-
NSS96_RS16555 (NSS96_16555)	-	3201176..3201754 (-)	579	WP_024426253.1	DUF6470 family protein	-
NSS96_RS16560 (NSS96_16560)	flgL	3201801..3202709 (-)	909	WP_034281095.1	flagellar hook-associated protein FlgL	-
NSS96_RS16565 (NSS96_16565)	flgK	3202719..3204239 (-)	1521	WP_024423618.1	flagellar hook-associated protein FlgK	-
NSS96_RS16570 (NSS96_16570)	-	3204255..3204737 (-)	483	WP_024423619.1	flagellar protein FlgN	-
NSS96_RS16575 (NSS96_16575)	flgM	3204756..3205019 (-)	264	WP_024423620.1	flagellar biosynthesis anti-sigma factor FlgM	-
NSS96_RS16580 (NSS96_16580)	-	3205099..3205518 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSS96_RS16585 (NSS96_16585)	comFC	3205575..3206231 (-)	657	WP_260983460.1	ComF family protein	Machinery gene
NSS96_RS16590 (NSS96_16590)	-	3206258..3206551 (-)	294	WP_024423623.1	competence protein ComFB	-
NSS96_RS16595 (NSS96_16595)	comFA	3206600..3208000 (-)	1401	WP_309300290.1	DEAD/DEAH box helicase	Machinery gene
NSS96_RS16600 (NSS96_16600)	-	3208118..3208960 (-)	843	WP_024423625.1	DegV family protein	-
NSS96_RS16605 (NSS96_16605)	degU	3209176..3209865 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSS96_RS16610 (NSS96_16610)	degS	3209930..3211105 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 218 a.a.
• Molecular weight: 24841.89 Da
• Isoelectric Point: 9.9148

>NTDB_id=983209 NSS96_RS16585 WP_260983460.1 3205575..3206231(-) (comFC) [Bacillus sp. FSL W7-1336]
MPAFTWKSFLLLNDDRLCVACKNHLVKIDRPICPTCGRAQSNDQLCQDCNSWNERSDSTKVLVKNRSVYTYNDLMKDVLA
RFKFRGDTALAELFKKDVQAAFKHSFCIKDPLLIPIPLSHERLKERGFNQSVIIASLLDKPILQPLVKIHQSKQSKKKKN
ERLDQKGLFQIKQTDAIVQRDIILVDDIYTTGATIYDAARILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 657 bp

>NTDB_id=983209 NSS96_RS16585 WP_260983460.1 3205575..3206231(-) (comFC) [Bacillus sp. FSL W7-1336]
GTGCCTGCTTTTACATGGAAATCATTCCTACTATTAAATGATGATCGTCTTTGTGTAGCATGTAAGAATCACTTAGTAAA
GATTGATCGTCCTATTTGTCCAACATGCGGAAGGGCGCAGTCAAATGACCAATTATGCCAGGACTGTAATAGTTGGAATG
AACGCTCTGATTCTACTAAAGTCCTTGTAAAAAATAGGTCAGTTTATACTTACAATGATTTGATGAAAGATGTCCTTGCC
CGCTTTAAATTTCGGGGTGATACGGCTTTAGCTGAGCTGTTTAAAAAAGATGTACAAGCAGCATTTAAACATTCCTTCTG
CATAAAAGACCCATTGCTGATACCGATCCCTTTAAGTCATGAAAGACTAAAAGAAAGAGGATTTAATCAGTCCGTGATAA
TCGCTTCTTTGCTAGATAAGCCAATATTGCAGCCACTCGTGAAAATACATCAAAGTAAGCAGTCTAAAAAAAAGAAAAAT
GAACGCCTAGATCAAAAAGGATTGTTTCAAATCAAGCAAACAGATGCGATTGTTCAAAGGGATATTATATTAGTTGATGA
TATCTATACAACGGGAGCAACCATCTATGATGCGGCAAGAATTTTGAAAGACGCAGGTGCTAAAAGTGTTTCTTCTTTTA
CGTTGATACGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (14-49)

• Phosphoribosyl transferase domain (Pribosyltran) (127-216)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	50.463	99.083	0.5
comFC/cflB	Streptococcus pneumoniae TIGR4	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae Rx1	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae D39	37.209	98.624	0.367
comFC/cflB	Streptococcus pneumoniae R6	37.209	98.624	0.367