Detailed information NTG0983212

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NSS96_RS16610
• Genome accession: NZ_CP151980
• Coordinates: 3209930..3211105 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. FSL W7-1336
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3204930..3216105

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSS96_RS16580 (NSS96_16580)	-	3205099..3205518 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
NSS96_RS16585 (NSS96_16585)	comFC	3205575..3206231 (-)	657	WP_260983460.1	ComF family protein	Machinery gene
NSS96_RS16590 (NSS96_16590)	-	3206258..3206551 (-)	294	WP_024423623.1	competence protein ComFB	-
NSS96_RS16595 (NSS96_16595)	comFA	3206600..3208000 (-)	1401	WP_309300290.1	DEAD/DEAH box helicase	Machinery gene
NSS96_RS16600 (NSS96_16600)	-	3208118..3208960 (-)	843	WP_024423625.1	DegV family protein	-
NSS96_RS16605 (NSS96_16605)	degU	3209176..3209865 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NSS96_RS16610 (NSS96_16610)	degS	3209930..3211105 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
NSS96_RS16615 (NSS96_16615)	-	3211326..3211994 (+)	669	WP_012011434.1	YigZ family protein	-
NSS96_RS16620 (NSS96_16620)	-	3211979..3213070 (+)	1092	WP_034281103.1	LCP family protein	-
NSS96_RS16625 (NSS96_16625)	-	3213106..3214173 (-)	1068	WP_024423627.1	MraY family glycosyltransferase	-
NSS96_RS16630 (NSS96_16630)	-	3214308..3215504 (-)	1197	WP_034281445.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=983212 NSS96_RS16610 WP_003213166.1 3209930..3211105(-) (degS) [Bacillus sp. FSL W7-1336]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=983212 NSS96_RS16610 WP_003213166.1 3209930..3211105(-) (degS) [Bacillus sp. FSL W7-1336]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGGTTATTAAGTTTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCGCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTAAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCTTTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841