Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | NSU09_RS14575 | Genome accession | NZ_CP151942 |
| Coordinates | 2715415..2715750 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus sp. PS194 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2710415..2720750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU09_RS14555 (NSU09_14555) | gcvT | 2711008..2712096 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| NSU09_RS14560 (NSU09_14560) | - | 2712537..2714210 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| NSU09_RS14565 (NSU09_14565) | - | 2714231..2715025 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| NSU09_RS14570 (NSU09_14570) | sinI | 2715208..2715381 (+) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| NSU09_RS14575 (NSU09_14575) | sinR | 2715415..2715750 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| NSU09_RS14580 (NSU09_14580) | tasA | 2715843..2716628 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| NSU09_RS14585 (NSU09_14585) | - | 2716692..2717264 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| NSU09_RS14590 (NSU09_14590) | tapA | 2717248..2718009 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSU09_RS14595 (NSU09_14595) | - | 2718281..2718607 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSU09_RS14600 (NSU09_14600) | - | 2718649..2718828 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| NSU09_RS14605 (NSU09_14605) | comGG | 2718900..2719274 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| NSU09_RS14610 (NSU09_14610) | comGF | 2719275..2719658 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| NSU09_RS14615 (NSU09_14615) | comGE | 2719684..2720031 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| NSU09_RS14620 (NSU09_14620) | comGD | 2720015..2720446 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| NSU09_RS14625 (NSU09_14625) | comGC | 2720436..2720732 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=981474 NSU09_RS14575 WP_003226345.1 2715415..2715750(+) (sinR) [Bacillus sp. PS194]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=981474 NSU09_RS14575 WP_003226345.1 2715415..2715750(+) (sinR) [Bacillus sp. PS194]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
ACAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |