Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NSU09_RS14625 | Genome accession | NZ_CP151942 |
| Coordinates | 2720436..2720732 (-) | Length | 98 a.a. |
| NCBI ID | WP_029726719.1 | Uniprot ID | - |
| Organism | Bacillus sp. PS194 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2715436..2725732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU09_RS14580 (NSU09_14580) | tasA | 2715843..2716628 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| NSU09_RS14585 (NSU09_14585) | - | 2716692..2717264 (-) | 573 | WP_072692741.1 | signal peptidase I | - |
| NSU09_RS14590 (NSU09_14590) | tapA | 2717248..2718009 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSU09_RS14595 (NSU09_14595) | - | 2718281..2718607 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSU09_RS14600 (NSU09_14600) | - | 2718649..2718828 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| NSU09_RS14605 (NSU09_14605) | comGG | 2718900..2719274 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| NSU09_RS14610 (NSU09_14610) | comGF | 2719275..2719658 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| NSU09_RS14615 (NSU09_14615) | comGE | 2719684..2720031 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| NSU09_RS14620 (NSU09_14620) | comGD | 2720015..2720446 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| NSU09_RS14625 (NSU09_14625) | comGC | 2720436..2720732 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| NSU09_RS14630 (NSU09_14630) | comGB | 2720746..2721783 (-) | 1038 | WP_029726718.1 | comG operon protein ComGB | Machinery gene |
| NSU09_RS14635 (NSU09_14635) | comGA | 2721770..2722840 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| NSU09_RS14640 (NSU09_14640) | - | 2723053..2723250 (-) | 198 | WP_029726717.1 | hypothetical protein | - |
| NSU09_RS14645 (NSU09_14645) | corA | 2723252..2724205 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| NSU09_RS14650 (NSU09_14650) | - | 2724348..2725676 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10835.67 Da Isoelectric Point: 6.2112
>NTDB_id=981479 NSU09_RS14625 WP_029726719.1 2720436..2720732(-) (comGC) [Bacillus sp. PS194]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKNDAV
CPNGKRIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKNDAV
CPNGKRIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=981479 NSU09_RS14625 WP_029726719.1 2720436..2720732(-) (comGC) [Bacillus sp. PS194]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAGCATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAACGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAGCATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAACGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |