Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | ACNR0F_RS07090 | Genome accession | NZ_CP183037 |
| Coordinates | 1308429..1309709 (-) | Length | 426 a.a. |
| NCBI ID | WP_003787551.1 | Uniprot ID | F5S877 |
| Organism | Kingella kingae strain URMC_2412A945 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1303429..1314709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNR0F_RS07065 (ACNR0F_07065) | folD | 1304466..1305317 (+) | 852 | WP_003791096.1 | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD | - |
| ACNR0F_RS07070 (ACNR0F_07070) | - | 1305460..1306830 (+) | 1371 | WP_418604814.1 | GntP family permease | - |
| ACNR0F_RS07075 (ACNR0F_07075) | - | 1306955..1307464 (+) | 510 | WP_003787558.1 | gluconokinase | - |
| ACNR0F_RS07080 (ACNR0F_07080) | - | 1307534..1307911 (-) | 378 | WP_032133999.1 | diacylglycerol kinase | - |
| ACNR0F_RS07085 (ACNR0F_07085) | - | 1307908..1308351 (-) | 444 | WP_038311309.1 | peroxiredoxin | - |
| ACNR0F_RS07090 (ACNR0F_07090) | pilU | 1308429..1309709 (-) | 1281 | WP_003787551.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACNR0F_RS07095 (ACNR0F_07095) | pilT | 1309729..1310769 (-) | 1041 | WP_003791105.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACNR0F_RS07100 (ACNR0F_07100) | pseC | 1310977..1312134 (-) | 1158 | WP_038311307.1 | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | - |
| ACNR0F_RS07105 (ACNR0F_07105) | - | 1312247..1313422 (-) | 1176 | WP_003787543.1 | alpha-hydroxy acid oxidase | - |
Sequence
Protein
Download Length: 426 a.a. Molecular weight: 47321.06 Da Isoelectric Point: 6.2389
>NTDB_id=981476 ACNR0F_RS07090 WP_003787551.1 1308429..1309709(-) (pilU) [Kingella kingae strain URMC_2412A945]
MAEQDITSLLEGFVNNYKVTNDAAKPAAPAGRAVPASAQATATASEIAPAKKSGLHPLLEKMAAECEKRGASDIFISAGF
PPSFKINGELTPVPLKPLTQQDTQILVYSTMSPDQRARFDHELELNYSVSSSEGIRFRVNSYHEQGRMGMVWRRITTKIL
TVDDLQLPQGLKDLAMQPRGLLILAGATGSGKSTSMAAMLDWRNKHAAGHIVTIEDPVEYLHKPIKSIFTQRELGVDTNS
WSMAVQSAMRQAPDVVCVGEVRNEHTMEYALQLAQTGHLCIFTIHANNAVQTIERIMNFYPEERHQQVLMDLALNTVGII
GQRLARLKGGGRTAIVDLLINSPAMQDHIFKGELMEAMSLMNRSETDGMQTFDQDLFRLYTEDKITYEEALRQAESVNDL
RLKIKLWEEGNAKDHIFERVGGLSLQ
MAEQDITSLLEGFVNNYKVTNDAAKPAAPAGRAVPASAQATATASEIAPAKKSGLHPLLEKMAAECEKRGASDIFISAGF
PPSFKINGELTPVPLKPLTQQDTQILVYSTMSPDQRARFDHELELNYSVSSSEGIRFRVNSYHEQGRMGMVWRRITTKIL
TVDDLQLPQGLKDLAMQPRGLLILAGATGSGKSTSMAAMLDWRNKHAAGHIVTIEDPVEYLHKPIKSIFTQRELGVDTNS
WSMAVQSAMRQAPDVVCVGEVRNEHTMEYALQLAQTGHLCIFTIHANNAVQTIERIMNFYPEERHQQVLMDLALNTVGII
GQRLARLKGGGRTAIVDLLINSPAMQDHIFKGELMEAMSLMNRSETDGMQTFDQDLFRLYTEDKITYEEALRQAESVNDL
RLKIKLWEEGNAKDHIFERVGGLSLQ
Nucleotide
Download Length: 1281 bp
>NTDB_id=981476 ACNR0F_RS07090 WP_003787551.1 1308429..1309709(-) (pilU) [Kingella kingae strain URMC_2412A945]
ATGGCAGAACAAGACATCACTTCCCTACTTGAAGGTTTTGTAAACAATTACAAAGTAACCAACGATGCCGCCAAGCCTGC
TGCACCAGCAGGACGAGCCGTGCCTGCATCGGCACAAGCCACGGCAACGGCTTCGGAAATTGCGCCAGCCAAAAAATCGG
GCTTACACCCTTTGTTGGAAAAAATGGCTGCCGAATGTGAAAAACGCGGTGCATCGGATATTTTTATCAGCGCAGGTTTT
CCGCCATCATTCAAAATCAATGGCGAATTAACGCCTGTTCCGCTCAAACCGCTCACGCAGCAAGACACGCAAATTTTGGT
GTATTCCACCATGTCGCCAGACCAACGTGCGCGTTTTGACCACGAATTGGAATTGAACTATTCCGTGTCGTCTAGCGAGG
GTATTCGCTTTCGTGTGAACTCGTATCACGAACAAGGTCGCATGGGCATGGTGTGGCGTCGCATCACCACCAAAATCTTA
ACGGTTGATGATTTGCAGTTGCCACAAGGTTTAAAAGACTTGGCGATGCAGCCGCGCGGTTTGTTGATTTTGGCAGGCGC
AACGGGTTCGGGTAAATCTACGTCTATGGCGGCGATGCTGGACTGGCGTAACAAACACGCCGCAGGTCATATTGTGACCA
TTGAAGACCCTGTGGAATATCTGCACAAACCAATCAAGAGTATTTTCACGCAACGCGAATTGGGCGTGGATACGAATTCT
TGGTCAATGGCGGTGCAATCGGCAATGCGTCAAGCACCAGACGTGGTTTGTGTGGGCGAGGTGCGTAACGAACACACCAT
GGAATACGCTTTGCAACTGGCGCAAACAGGTCACTTGTGTATCTTTACTATTCACGCGAACAATGCCGTGCAAACCATTG
AGCGTATTATGAACTTCTATCCAGAAGAGCGTCATCAACAAGTATTGATGGACTTGGCGTTGAACACAGTGGGCATTATT
GGTCAGCGTTTGGCGCGATTGAAAGGCGGCGGACGTACGGCGATTGTGGATTTGTTGATTAACAGCCCTGCGATGCAAGA
CCACATTTTCAAAGGCGAGTTGATGGAAGCGATGTCGTTGATGAATCGTTCGGAAACAGACGGCATGCAAACGTTTGACC
AAGACTTGTTCCGCTTGTACACCGAAGACAAAATCACTTACGAAGAAGCCTTGCGCCAAGCTGAATCGGTAAACGACTTG
CGCTTGAAAATCAAATTGTGGGAAGAGGGTAATGCCAAAGACCATATCTTTGAGCGCGTGGGCGGTTTGAGCTTGCAATA
A
ATGGCAGAACAAGACATCACTTCCCTACTTGAAGGTTTTGTAAACAATTACAAAGTAACCAACGATGCCGCCAAGCCTGC
TGCACCAGCAGGACGAGCCGTGCCTGCATCGGCACAAGCCACGGCAACGGCTTCGGAAATTGCGCCAGCCAAAAAATCGG
GCTTACACCCTTTGTTGGAAAAAATGGCTGCCGAATGTGAAAAACGCGGTGCATCGGATATTTTTATCAGCGCAGGTTTT
CCGCCATCATTCAAAATCAATGGCGAATTAACGCCTGTTCCGCTCAAACCGCTCACGCAGCAAGACACGCAAATTTTGGT
GTATTCCACCATGTCGCCAGACCAACGTGCGCGTTTTGACCACGAATTGGAATTGAACTATTCCGTGTCGTCTAGCGAGG
GTATTCGCTTTCGTGTGAACTCGTATCACGAACAAGGTCGCATGGGCATGGTGTGGCGTCGCATCACCACCAAAATCTTA
ACGGTTGATGATTTGCAGTTGCCACAAGGTTTAAAAGACTTGGCGATGCAGCCGCGCGGTTTGTTGATTTTGGCAGGCGC
AACGGGTTCGGGTAAATCTACGTCTATGGCGGCGATGCTGGACTGGCGTAACAAACACGCCGCAGGTCATATTGTGACCA
TTGAAGACCCTGTGGAATATCTGCACAAACCAATCAAGAGTATTTTCACGCAACGCGAATTGGGCGTGGATACGAATTCT
TGGTCAATGGCGGTGCAATCGGCAATGCGTCAAGCACCAGACGTGGTTTGTGTGGGCGAGGTGCGTAACGAACACACCAT
GGAATACGCTTTGCAACTGGCGCAAACAGGTCACTTGTGTATCTTTACTATTCACGCGAACAATGCCGTGCAAACCATTG
AGCGTATTATGAACTTCTATCCAGAAGAGCGTCATCAACAAGTATTGATGGACTTGGCGTTGAACACAGTGGGCATTATT
GGTCAGCGTTTGGCGCGATTGAAAGGCGGCGGACGTACGGCGATTGTGGATTTGTTGATTAACAGCCCTGCGATGCAAGA
CCACATTTTCAAAGGCGAGTTGATGGAAGCGATGTCGTTGATGAATCGTTCGGAAACAGACGGCATGCAAACGTTTGACC
AAGACTTGTTCCGCTTGTACACCGAAGACAAAATCACTTACGAAGAAGCCTTGCGCCAAGCTGAATCGGTAAACGACTTG
CGCTTGAAAATCAAATTGTGGGAAGAGGGTAATGCCAAAGACCATATCTTTGAGCGCGTGGGCGGTTTGAGCTTGCAATA
A
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
47.696 |
86.62 |
0.413 |
| pilU | Acinetobacter baylyi ADP1 |
49.711 |
81.221 |
0.404 |
| pilU | Vibrio cholerae strain A1552 |
46.429 |
78.873 |
0.366 |