Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   NSU09_RS14570 Genome accession   NZ_CP151942
Coordinates   2715208..2715381 (+) Length   57 a.a.
NCBI ID   WP_003230187.1    Uniprot ID   A0A063X7W9
Organism   Bacillus sp. PS194     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 2710208..2720381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU09_RS14555 (NSU09_14555) gcvT 2711008..2712096 (-) 1089 WP_015714248.1 glycine cleavage system aminomethyltransferase GcvT -
  NSU09_RS14560 (NSU09_14560) - 2712537..2714210 (+) 1674 WP_029726726.1 SNF2-related protein -
  NSU09_RS14565 (NSU09_14565) - 2714231..2715025 (+) 795 WP_015714249.1 YqhG family protein -
  NSU09_RS14570 (NSU09_14570) sinI 2715208..2715381 (+) 174 WP_003230187.1 anti-repressor SinI family protein Regulator
  NSU09_RS14575 (NSU09_14575) sinR 2715415..2715750 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  NSU09_RS14580 (NSU09_14580) tasA 2715843..2716628 (-) 786 WP_014664586.1 biofilm matrix protein TasA -
  NSU09_RS14585 (NSU09_14585) - 2716692..2717264 (-) 573 WP_072692741.1 signal peptidase I -
  NSU09_RS14590 (NSU09_14590) tapA 2717248..2718009 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  NSU09_RS14595 (NSU09_14595) - 2718281..2718607 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  NSU09_RS14600 (NSU09_14600) - 2718649..2718828 (-) 180 WP_029726723.1 YqzE family protein -
  NSU09_RS14605 (NSU09_14605) comGG 2718900..2719274 (-) 375 WP_029726722.1 ComG operon protein ComGG Machinery gene
  NSU09_RS14610 (NSU09_14610) comGF 2719275..2719658 (-) 384 WP_029726721.1 ComG operon protein ComGF Machinery gene
  NSU09_RS14615 (NSU09_14615) comGE 2719684..2720031 (-) 348 WP_014480255.1 ComG operon protein 5 Machinery gene

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6601.52 Da        Isoelectric Point: 6.7231

>NTDB_id=981473 NSU09_RS14570 WP_003230187.1 2715208..2715381(+) (sinI) [Bacillus sp. PS194]
MKNAKQEHFELDQEWVELMVEAKEANISPEEIRKYLLLNKKSAHPGPAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=981473 NSU09_RS14570 WP_003230187.1 2715208..2715381(+) (sinI) [Bacillus sp. PS194]
ATGAAGAATGCAAAACAAGAGCACTTTGAATTGGATCAAGAATGGGTTGAATTAATGGTGGAAGCCAAAGAGGCAAATAT
CAGCCCGGAAGAAATACGAAAATATTTACTTTTAAACAAAAAGTCTGCTCATCCTGGTCCGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-36)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A063X7W9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment