Detailed information NTG0097980

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: R8566_RS10225
• Genome accession: NZ_AP026920
• Coordinates: 1960622..1961101 (-)
• Length: 159 a.a.
• NCBI ID: WP_000588864.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700014
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1955622..1966101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8566_RS10225 (PC0014_20140)	comX/comX2	1960622..1961101 (-)	480	WP_000588864.1	sigma-70 family RNA polymerase sigma factor	Regulator
R8566_RS10230 (PC0014_20150)	nusG	1961223..1961759 (-)	537	WP_000376736.1	transcription termination/antitermination protein NusG	-
R8566_RS10235 (PC0014_20160)	secE	1961814..1961990 (-)	177	WP_001210991.1	preprotein translocase subunit SecE	-
R8566_RS10240 (PC0014_20170)	rpmG	1962000..1962152 (-)	153	WP_001809375.1	50S ribosomal protein L33	-
R8566_RS10245 (PC0014_20180)	pbp2a	1962205..1964400 (-)	2196	WP_000762619.1	penicillin-binding protein PBP2A	-
R8566_RS10250 (PC0014_20190)	-	1964487..1965362 (+)	876	WP_075213619.1	RluA family pseudouridine synthase	-

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19845.46 Da
• Isoelectric Point: 7.3797

>NTDB_id=97980 R8566_RS10225 WP_000588864.1 1960622..1961101(-) (comX/comX2) [Streptococcus pneumoniae strain PZ900700014]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWDQEGMLCLHELISREEGLADDIPRLRKYFKTKFRNRILDYIRKQESQKRR
YDKEPYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH

Nucleotide

• Length: 480 bp

>NTDB_id=97980 R8566_RS10225 WP_000588864.1 1960622..1961101(-) (comX/comX2) [Streptococcus pneumoniae strain PZ900700014]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGACCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGCAGACGATATTCCAC
GTTTAAGGAAATATTTCAAAACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAGCAGGAAAGTCAGAAGCGTAGA
TACGATAAAGAACCCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGAGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCACTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX2	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae Rx1	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae D39	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX1	Streptococcus pneumoniae R6	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae TIGR4	98.742	100	0.987
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	91.824	100	0.918
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	89.937	100	0.899
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	89.873	99.371	0.893
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.718	98.113	0.478
comX/sigX	Streptococcus mutans UA159	46	94.34	0.434
comX/sigX	Streptococcus suis isolate S10	45.033	94.969	0.428
comX/sigX	Streptococcus suis D9	45.033	94.969	0.428
comX/sigX	Streptococcus suis P1/7	45.033	94.969	0.428
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377