Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   WMW89_RS10640 Genome accession   NZ_CP151421
Coordinates   2224664..2225962 (+) Length   432 a.a.
NCBI ID   WP_033625178.1    Uniprot ID   -
Organism   Enterococcus faecalis strain HMRC07H23     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2219664..2230962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WMW89_RS10635 (WMW89_10630) rlmH 2223784..2224263 (-) 480 WP_002355021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  WMW89_RS10640 (WMW89_10635) htrA 2224664..2225962 (+) 1299 WP_033625178.1 S1C family serine protease Regulator
  WMW89_RS10645 (WMW89_10640) ytpR 2226009..2226629 (-) 621 WP_002361057.1 YtpR family tRNA-binding protein -
  WMW89_RS10650 (WMW89_10645) - 2226840..2227295 (-) 456 WP_002385249.1 universal stress protein -
  WMW89_RS10655 (WMW89_10650) - 2227443..2227757 (-) 315 WP_002355015.1 thioredoxin family protein -
  WMW89_RS10660 (WMW89_10655) pepA 2227769..2228845 (-) 1077 WP_002355013.1 glutamyl aminopeptidase -
  WMW89_RS10665 (WMW89_10660) - 2229152..2229493 (+) 342 WP_002355012.1 PepSY domain-containing protein -

Sequence


Protein


Download         Length: 432 a.a.        Molecular weight: 44861.98 Da        Isoelectric Point: 4.9968

>NTDB_id=976478 WMW89_RS10640 WP_033625178.1 2224664..2225962(+) (htrA) [Enterococcus faecalis strain HMRC07H23]
MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNAATTTSTNHGDTKVSNVSYNVSSDVTKAVK
KVQNSVVSVINMQSASNNSSADDPFGGLFGGNEGTQDSSSNNGNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLE
VVLSDGTKVKGELVGTDAYTDLAVIKISSDKVDQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK
NESGETININAIQTDAAINPGNSGGPLINIEGQVIGINSVKIVQSTSQVSVEGMGFAIPSNDVVNIINQLEKDGKVTRPA
LGITMSDLTGISSQQQEQILKIPASVKTGVVVRGVEAATPAEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKME
VTYYRGSKEMKATIDLTIDKSALTQQNNRSNQ

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=976478 WMW89_RS10640 WP_033625178.1 2224664..2225962(+) (htrA) [Enterococcus faecalis strain HMRC07H23]
ATGCAACGAAAAGATGTTACACCTAATTCAGATAAAAAAAGTTTATTGCAAAAATTTGGGATTGGTTTAGCTGGCGGCTT
ACTTGGTGGCGCCCTTATTCTAGGAGGCGCTTATTCTGGGATTATTCCCACACCCAACGGCGGAAATAATGCGGCGACGA
CGACGTCCACTAATCACGGCGACACAAAAGTCAGCAATGTGAGTTACAATGTGTCTAGCGATGTCACAAAAGCCGTGAAA
AAAGTTCAAAATTCTGTGGTTTCTGTCATTAATATGCAAAGTGCTAGCAACAATTCTTCGGCAGATGATCCTTTTGGGGG
ATTGTTCGGTGGGAATGAAGGTACTCAAGACTCTTCCAGCAACAATGGTAACGATTTAGAAGCAGCCAGTGAAGGTAGTG
GGGTTATTTATAAGAAAGATGGTAAAACGGCTTATGTCGTGACAAATAACCACGTCGTAGATAAAGCGCAAGGATTGGAA
GTTGTTTTATCTGATGGTACCAAAGTGAAAGGCGAATTAGTCGGAACCGATGCTTACACGGATTTAGCCGTGATTAAAAT
TTCTTCCGACAAAGTTGATCAAGTCGCTGAGTTTGGGAATTCTAGTAAAATCACAGTCGGTGAGCCTGCTATTGCGATTG
GTTCCCCTCTAGGCTCTGATTATGCTAACTCTGTCACACAAGGAATCATCTCTTCTGTGAATAGAAATATTACCAATAAA
AACGAGTCTGGTGAAACCATCAATATTAATGCCATTCAAACCGATGCTGCCATCAATCCAGGAAACTCTGGTGGTCCACT
AATCAATATTGAAGGACAAGTCATTGGCATTAACTCAGTAAAAATTGTGCAATCAACTAGTCAAGTGAGCGTTGAAGGGA
TGGGCTTTGCCATTCCAAGTAATGACGTAGTCAACATTATCAACCAATTAGAAAAAGATGGTAAAGTGACGCGGCCAGCT
CTCGGGATTACGATGTCTGATTTAACAGGTATCTCTTCACAACAACAAGAACAAATTTTAAAAATTCCAGCTTCTGTAAA
AACTGGCGTAGTGGTTCGTGGTGTTGAAGCAGCGACCCCTGCTGAAAAGGCTGGATTGGAAAAATACGATGTTATCACGA
AAGTTGACGGCCAAGACGTAAGCTCTACTACAGATTTACAAAGCGCGCTTTACAAGAAAAAAGTTGGCGACAAAATGGAA
GTGACTTATTATCGTGGTTCTAAAGAAATGAAAGCAACTATCGATTTAACCATTGATAAATCAGCTTTAACACAACAAAA
TAATCGCAGCAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

53.659

94.907

0.509

  htrA Streptococcus mutans UA159

58.63

84.491

0.495

  htrA Streptococcus mitis NCTC 12261

55.135

85.648

0.472

  htrA Streptococcus pneumoniae TIGR4

55.807

81.713

0.456

  htrA Streptococcus pneumoniae Rx1

55.807

81.713

0.456

  htrA Streptococcus pneumoniae D39

55.807

81.713

0.456

  htrA Streptococcus pneumoniae R6

55.807

81.713

0.456


Multiple sequence alignment