Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   R8775_RS02655 Genome accession   NZ_AP026915
Coordinates   503104..503841 (+) Length   245 a.a.
NCBI ID   WP_001219137.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain PZ900700005     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 498104..508841
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8775_RS02620 - 499079..499273 (-) 195 WP_001808905.1 hypothetical protein -
  R8775_RS02625 (PC0005_05110) - 499435..499722 (-) 288 WP_000777753.1 hypothetical protein -
  R8775_RS02630 (PC0005_05120) - 499732..500142 (-) 411 WP_001278304.1 HIT family protein -
  R8775_RS02635 (PC0005_05130) pptA 500210..500941 (+) 732 WP_000889923.1 ABC transporter ATP-binding protein Regulator
  R8775_RS02640 (PC0005_05140) - 500938..501987 (+) 1050 WP_000653751.1 ABC transporter permease -
  R8775_RS02645 (PC0005_05150) - 502155..502484 (-) 330 WP_000132572.1 hypothetical protein -
  R8775_RS02650 (PC0005_05160) - 502761..503099 (+) 339 WP_044792896.1 LytTR family DNA-binding domain-containing protein -
  R8775_RS02655 (PC0005_05170) comE/blpR 503104..503841 (+) 738 WP_001219137.1 LytTR family DNA-binding domain-containing protein Regulator
  R8775_RS02660 (PC0005_05180) - 503855..505195 (+) 1341 WP_001099893.1 sensor histidine kinase -
  R8775_RS02665 (PC0005_05190) blpC 505239..505394 (-) 156 WP_000358811.1 quorum-sensing system pheromone BlpC -
  R8775_RS02670 (PC0005_05200) - 505451..506812 (-) 1362 WP_050233594.1 bacteriocin secretion accessory protein -
  R8775_RS02675 (PC0005_05210) comA/nlmT 506823..506987 (-) 165 WP_306420852.1 hypothetical protein Regulator
  R8775_RS02680 (PC0005_05220) blpA 507197..508498 (-) 1302 Protein_529 peptide cleavage/export ABC transporter BlpA -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28768.92 Da        Isoelectric Point: 6.2366

>NTDB_id=97551 R8775_RS02655 WP_001219137.1 503104..503841(+) (comE/blpR) [Streptococcus pneumoniae strain PZ900700005]
MRIFVLEDDFSQQTRIETTIEKLLKEHHITLSSFEVFGKPDQLLAEVHEKGAHQLFFLDIEIRNEEMKGLEVARKIRDRD
PYALIVFVTTHSEFMPLSFRYQVSALDYIDKALSAEEFESRIETALLYANGQDSKSLAEDCFYFKSKFAQFQYPFKEVYY
LETSTRPHRVILYTKTDRLEFTASLEEVLKQEPRLLQCHRSFLINPANVVHLDKKEKLLFFPNGGSCLIARYKVREVSEA
INNLH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=97551 R8775_RS02655 WP_001219137.1 503104..503841(+) (comE/blpR) [Streptococcus pneumoniae strain PZ900700005]
ATGAGAATATTTGTTTTAGAGGATGATTTTTCCCAACAGACTAGAATTGAAACGACGATTGAGAAACTCTTGAAGGAACA
TCATATCACTCTGAGTTCTTTTGAAGTTTTTGGTAAGCCAGATCAATTGCTGGCAGAGGTGCATGAGAAGGGGGCCCATC
AGCTATTCTTTTTGGATATTGAGATTCGAAATGAGGAGATGAAGGGTCTGGAAGTGGCTAGAAAGATTCGGGATCGGGAT
CCGTATGCCCTGATTGTCTTTGTGACGACTCACTCGGAGTTTATGCCCCTGTCCTTTCGCTACCAAGTGTCTGCTCTGGA
CTATATTGATAAGGCCCTTTCGGCAGAGGAGTTTGAATCTCGTATCGAGACAGCCCTCCTCTATGCCAATGGTCAAGACA
GTAAAAGTCTAGCGGAAGATTGCTTTTACTTTAAATCAAAATTTGCTCAATTCCAGTATCCTTTTAAAGAGGTTTACTAT
CTCGAAACGTCCACAAGACCCCATCGTGTTATTCTCTATACCAAGACAGACAGGCTGGAATTTACAGCGAGTCTAGAGGA
GGTTCTCAAGCAGGAGCCTCGTCTCTTGCAGTGCCATCGCTCTTTTCTCATCAATCCTGCCAATGTGGTGCATTTAGATA
AGAAAGAAAAACTGCTTTTCTTTCCCAATGGTGGAAGTTGTCTAATCGCGCGTTATAAGGTCAGGGAAGTGTCTGAGGCT
ATTAATAACTTACACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

53.441

100

0.539

  comE/comE1 Streptococcus equinus JB1

43.038

96.735

0.416

  comE/comE2 Streptococcus equinus JB1

38.43

98.776

0.38


Multiple sequence alignment