Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | WOC65_RS04230 | Genome accession | NZ_CP150756 |
| Coordinates | 881265..881660 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain TUM22188 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 876265..886660
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC65_RS04200 (WOC65_04190) | - | 877524..877928 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| WOC65_RS04205 (WOC65_04195) | - | 878266..878358 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| WOC65_RS04210 (WOC65_04200) | - | 878490..878723 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| WOC65_RS04215 (WOC65_04205) | murA | 878834..880099 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| WOC65_RS04220 (WOC65_04210) | fabZ | 880133..880573 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| WOC65_RS04225 (WOC65_04215) | - | 880631..881071 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| WOC65_RS04230 (WOC65_04220) | ssb | 881265..881660 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| WOC65_RS04235 (WOC65_04225) | sceD | 882049..882744 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| WOC65_RS04240 (WOC65_04230) | tenA | 883268..883957 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| WOC65_RS04245 (WOC65_04235) | thiD | 883950..884780 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WOC65_RS04250 (WOC65_04240) | thiM | 884764..885564 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| WOC65_RS04255 (WOC65_04245) | thiE | 885557..886198 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=971908 WOC65_RS04230 WP_000932692.1 881265..881660(+) (ssb) [Staphylococcus aureus strain TUM22188]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=971908 WOC65_RS04230 WP_000932692.1 881265..881660(+) (ssb) [Staphylococcus aureus strain TUM22188]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |