Detailed information
Bioinformatically predicted
Overview
| Name | comGD | Type | Machinery gene |
| Locus tag | WOC66_RS13810 | Genome accession | NZ_CP150743 |
| Coordinates | 2781529..2781975 (-) | Length | 148 a.a. |
| NCBI ID | WP_001790850.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain TUM22705 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2776529..2786975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WOC66_RS13780 (WOC66_13780) | gcvPA | 2777455..2778801 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| WOC66_RS13785 (WOC66_13785) | gcvT | 2778821..2779912 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| WOC66_RS13790 (WOC66_13790) | - | 2780071..2780595 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| WOC66_RS13795 (WOC66_13795) | - | 2780585..2780731 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| WOC66_RS13800 (WOC66_13800) | comGF | 2780828..2781325 (-) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| WOC66_RS13805 (WOC66_13805) | comGE | 2781243..2781542 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| WOC66_RS13810 (WOC66_13810) | comGD | 2781529..2781975 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| WOC66_RS13815 (WOC66_13815) | comGC | 2781953..2782264 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| WOC66_RS13820 (WOC66_13820) | comGB | 2782278..2783348 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| WOC66_RS13825 (WOC66_13825) | comGA | 2783320..2784294 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 17213.42 Da Isoelectric Point: 10.3682
>NTDB_id=971630 WOC66_RS13810 WP_001790850.1 2781529..2781975(-) (comGD) [Staphylococcus aureus strain TUM22705]
MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYIKSQAIANQGYINVRFYENSD
TIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKFGSITIYNNNSIYRIIFHIEKGRIRYEKL
MEKQLQIRKQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEANIISFITELNYIKSQAIANQGYINVRFYENSD
TIKVIENNKIRFLKLKVGKIINVAKVDIIAFDKKGNINKFGSITIYNNNSIYRIIFHIEKGRIRYEKL
Nucleotide
Download Length: 447 bp
>NTDB_id=971630 WOC66_RS13810 WP_001790850.1 2781529..2781975(-) (comGD) [Staphylococcus aureus strain TUM22705]
ATGGAGAAGCAGTTGCAAATTAGAAAGCAGTCAGCATTTACTATGATTGAGATGCTTGTGGTAATGATGTTAATCAGTAT
ATTTCTACTTTTGACAATGACATCTAAAGGATTAAGCAATCTTAGAGTAATAGATGATGAGGCAAATATCATTTCTTTTA
TTACTGAATTGAATTATATTAAGTCGCAAGCTATAGCAAATCAAGGATATATCAATGTTAGATTTTATGAAAACAGTGAC
ACTATTAAAGTAATAGAGAATAATAAAATACGATTTCTAAAATTAAAAGTAGGCAAAATAATTAATGTTGCAAAAGTTGA
TATTATTGCCTTTGATAAAAAAGGGAATATCAATAAATTTGGTAGCATAACAATTTACAATAACAATTCAATTTATAGAA
TAATATTCCATATTGAAAAAGGAAGAATTCGTTATGAAAAGCTATAA
ATGGAGAAGCAGTTGCAAATTAGAAAGCAGTCAGCATTTACTATGATTGAGATGCTTGTGGTAATGATGTTAATCAGTAT
ATTTCTACTTTTGACAATGACATCTAAAGGATTAAGCAATCTTAGAGTAATAGATGATGAGGCAAATATCATTTCTTTTA
TTACTGAATTGAATTATATTAAGTCGCAAGCTATAGCAAATCAAGGATATATCAATGTTAGATTTTATGAAAACAGTGAC
ACTATTAAAGTAATAGAGAATAATAAAATACGATTTCTAAAATTAAAAGTAGGCAAAATAATTAATGTTGCAAAAGTTGA
TATTATTGCCTTTGATAAAAAAGGGAATATCAATAAATTTGGTAGCATAACAATTTACAATAACAATTCAATTTATAGAA
TAATATTCCATATTGAAAAAGGAAGAATTCGTTATGAAAAGCTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGD | Staphylococcus aureus MW2 |
99.324 |
100 |
0.993 |
| comGD | Staphylococcus aureus N315 |
99.324 |
100 |
0.993 |