Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACLII2_RS03400 Genome accession   NZ_CP178213
Coordinates   649289..650002 (+) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis subsp. subtilis strain BM107     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 644289..655002
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLII2_RS03365 rppI 644535..645011 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  ACLII2_RS03370 rapZ 645036..645923 (+) 888 WP_003243903.1 RNase adapter RapZ -
  ACLII2_RS03375 mgfK 645925..646878 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  ACLII2_RS03380 whiA 646901..647851 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  ACLII2_RS03385 crh 647875..648132 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  ACLII2_RS03390 yvcN 648133..648897 (+) 765 WP_009968228.1 arylamine N-acetyltransferase family protein -
  ACLII2_RS03395 yvzJ 648933..649142 (-) 210 WP_003243327.1 lipoprotein -
  ACLII2_RS03400 braR 649289..650002 (+) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  ACLII2_RS03405 psdS 649996..651066 (+) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  ACLII2_RS03410 psdA 651149..651928 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  ACLII2_RS03415 psdB 651903..653843 (+) 1941 WP_003243432.1 lantibiotic ABC transporter permease PsdB -
  ACLII2_RS03420 ghrB 653881..654858 (-) 978 WP_010886621.1 bifunctional glyoxylate/hydroxypyruvate reductase B -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=970737 ACLII2_RS03400 WP_003244535.1 649289..650002(+) (braR) [Bacillus subtilis subsp. subtilis strain BM107]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=970737 ACLII2_RS03400 WP_003244535.1 649289..650002(+) (braR) [Bacillus subtilis subsp. subtilis strain BM107]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment